RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ZNF548Q8NEK5 533 aaPredicted RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 ANKRD20A12PQ8NF67 263 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 RDM1Q8NG50 284 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 OR52I2Q8NH67 350 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 BBS10Q8TAM1 723 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 THAP6Q8TBB0 222 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 MAGEC3Q8TD91 643 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 WFIKKN2Q8TEU8 576 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 IGFBPL1Q8WX77 278 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 SMPDL3BQ92485 455 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 DAZLQ92904 295 aaKnown RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 PIGTQ969N2 578 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 SPATA33Q96N06 139 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 KLHL5Q96PQ7 755 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 CRAMP1Q96RY5 1269 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 ATP6V0BQ99437 205 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 PCYT2Q99447 389 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 FEVQ99581 238 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 TRAF4Q9BUZ4 470 aaPredicted RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 LSG1Q9H089 658 aaKnown RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 TNMDQ9H2S6 317 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 SLA2Q9H6Q3 261 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 PLAC1Q9HBJ0 212 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 POT1Q9NUX5 634 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 HIF1ANQ9NWT6 349 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 NPAP1Q9NZP6 1156 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 FLRT1Q9NZU1 646 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 AGTPBP1Q9UPW5 1226 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 YIPF1Q9Y548 306 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 RAI2Q9Y5P3 530 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 PTGDR2Q9Y5Y4 395 aa2.22□□□□□ -2.05
GABPB1-209ENST00000559100 SPIN1Q9Y657 262 aaPredicted RBP2.22□□□□□ -2.05
GABPB1-209ENST00000559100 OBSCNQ5VST9 7968 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 C13orf42A0A1B0GVH6 325 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 OR2M5A3KFT3 312 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 OR5K3A6NET4 321 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 ANKRD66B4E2M5 251 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 C19orf81C9J6K1 198 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 INO80B-WBP1J3KQ70 363 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 TNFRSF13BO14836 293 aaPredicted RBP2.21□□□□□ -2.06
GABPB1-209ENST00000559100 SLC30A4O14863 429 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 TTI1O43156 1089 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 RGS14O43566 566 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 BUD23O43709 281 aaKnown RBP2.21□□□□□ -2.06
GABPB1-209ENST00000559100 SELENOFO60613 162 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 FCGR3BO75015 233 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 HSF2BPO75031 334 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 RPS6KA5O75582 802 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 RAD51DO75771 328 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 EPN2O95208 641 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 OLFM2O95897 454 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 GH1P01241 217 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 LCATP04180 440 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 STAG3L1P0CL83 205 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 SMIM18P0DKX4 95 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 C8orf89P0DMQ9 161 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 SAGP10523 405 aaPredicted RBP2.21□□□□□ -2.06
GABPB1-209ENST00000559100 PCP11498 1178 aaKnown RBP2.21□□□□□ -2.06
GABPB1-209ENST00000559100 PRF1P14222 555 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 TCF4P15884 667 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 EPORP19235 508 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 MPZP25189 248 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 LMO1P25800 156 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 CORO1AP31146 461 aaKnown RBP2.21□□□□□ -2.06
GABPB1-209ENST00000559100 SERPINB6P35237 376 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 HSD17B3P37058 310 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 CASP3P42574 277 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 NPBWR1P48145 328 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 RFX5P48382 616 aaPredicted RBP2.21□□□□□ -2.06
GABPB1-209ENST00000559100 AMTP48728 403 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 RGS7P49802 495 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 EVCP57679 992 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 KIAA1024LP59773 190 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 PTENP60484 403 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 POLR2FP61218 127 aaKnown RBP2.21□□□□□ -2.06
GABPB1-209ENST00000559100 ISL1P61371 349 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 TGFB2P61812 414 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 RPS18P62269 152 aaKnown RBP2.21□□□□□ -2.06
GABPB1-209ENST00000559100 DLK1P80370 383 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 GALK2Q01415 458 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 ROR2Q01974 943 aaKnown RBP2.21□□□□□ -2.06
GABPB1-209ENST00000559100 PRKCZQ05513 592 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 SRSF1Q07955 248 aaKnown RBP eCLIP2.21□□□□□ -2.06
GABPB1-209ENST00000559100 CRYZQ08257 329 aaKnown RBP2.21□□□□□ -2.06
GABPB1-209ENST00000559100 TROAPQ12815 778 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 PRKAA1Q13131 559 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 GPS2Q13227 327 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 SLC39A14Q15043 492 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 HLFQ16534 295 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 CALCRLQ16602 461 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 CDO1Q16878 200 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 CTU2Q2VPK5 515 aaKnown RBP2.21□□□□□ -2.06
GABPB1-209ENST00000559100 ODF3L2Q3SX64 289 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 FUT11Q495W5 492 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 MCMDC2Q4G0Z9 681 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 PARP10Q53GL7 1025 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 SETMARQ53H47 684 aaPredicted RBP2.21□□□□□ -2.06
GABPB1-209ENST00000559100 ASPRV1Q53RT3 343 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 XKR9Q5GH70 373 aa2.21□□□□□ -2.06
GABPB1-209ENST00000559100 MTX3Q5HYI7 312 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms