RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ARHGAP45Q92619 1136 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 SYN2Q92777 582 aaPredicted RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 HAS1Q92839 578 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 CAVIN3Q969G5 261 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 ORAI1Q96D31 301 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 MYADMQ96S97 322 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 GFI1Q99684 422 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 TPPP3Q9BW30 176 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 ATG10Q9H0Y0 220 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 CARD9Q9H257 536 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 SNX25Q9H3E2 840 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 ZNF703Q9H7S9 590 aaPredicted RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 CATSPERBQ9H7T0 1116 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 RPF1Q9H9Y2 349 aaKnown RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 SEBOXQ9HB31 216 aaPredicted RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 CDH20Q9HBT6 801 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 CPNE5Q9HCH3 593 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 ZFP64Q9NPA5 681 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 ATAD3AQ9NVI7 634 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 RCC2Q9P258 522 aaKnown RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 B3GALT5Q9Y2C3 310 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 UBE4BO95155 1302 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 A0A1B0GWJ7 208 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 FEZF1A0PJY2 475 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 FAM90A10PA6NDY2 464 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 TMEM221A6NGB7 291 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 C2CD4BA6NLJ0 364 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 F8WDY8 70 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 TLR4O00206 839 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 VWA5AO00534 786 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 KCNN4O15554 427 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 UGDHO60701 494 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 ATP6V1G1O75348 118 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 PGK2P07205 417 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 CSN3P07498 182 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 APOBEC1P41238 236 aaKnown RBP3.67□□□□□ -1.82
TDP1-217ENST00000557782 MAGEB1P43366 347 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 RAP1GAPP47736 663 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 PITPNBP48739 271 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 ALDH7A1P49419 539 aaKnown RBP3.67□□□□□ -1.82
TDP1-217ENST00000557782 GCNT1Q02742 428 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 EGR4Q05215 589 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 ST3GAL1Q11201 340 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 OVGP1Q12889 678 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 PLA2G7Q13093 441 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 RIPK1Q13546 671 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 RAPSNQ13702 412 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 GIT2Q14161 759 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 CEBPEQ15744 281 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 BOLA3Q53S33 107 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 ATAD3BQ5T9A4 648 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 STRIP1Q5VSL9 837 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 CENPPQ6IPU0 288 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 LCN10Q6JVE6 187 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 DUS1LQ6P1R4 473 aaKnown RBP3.67□□□□□ -1.82
TDP1-217ENST00000557782 KCTD18Q6PI47 426 aaPredicted RBP3.67□□□□□ -1.82
TDP1-217ENST00000557782 ARSKQ6UWY0 536 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 B3GLCTQ6Y288 498 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 SLC36A4Q6YBV0 504 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 ADAMTSL2Q86TH1 951 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 UNC5CLQ8IV45 518 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 C1orf210Q8IVY1 113 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 BEST3Q8N1M1 668 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 TEX45Q8NA69 505 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 LEMD2Q8NC56 503 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 OSR1Q8TAX0 266 aaPredicted RBP3.67□□□□□ -1.82
TDP1-217ENST00000557782 ARRDC2Q8TBH0 407 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 PPP4R1Q8TF05 950 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 SLC35F5Q8WV83 523 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 FIG4Q92562 907 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 TAAR8Q969N4 342 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 MTERF3Q96E29 417 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 ZNF503Q96F45 646 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 LINGO1Q96FE5 620 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 SLC22A12Q96S37 553 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 ERP44Q9BS26 406 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 C16orf70Q9BSU1 422 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 SSBP3Q9BWW4 388 aaPredicted RBP3.67□□□□□ -1.82
TDP1-217ENST00000557782 TSPYL1Q9H0U9 437 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 TMEM245Q9H330 911 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 CUEDC2Q9H467 287 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 TFB2MQ9H5Q4 396 aaKnown RBP3.67□□□□□ -1.82
TDP1-217ENST00000557782 MAGEF1Q9HAY2 307 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 HHATLQ9HCP6 504 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 MMP25Q9NPA2 562 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 SPAG4Q9NPE6 437 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 FAM212BQ9NTI7 297 aaPredicted RBP3.67□□□□□ -1.82
TDP1-217ENST00000557782 TXNDC16Q9P2K2 825 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 RHCGQ9UBD6 479 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 SNX6Q9UNH7 406 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 FOXA2Q9Y261 457 aaPredicted RBP3.67□□□□□ -1.82
TDP1-217ENST00000557782 NUDCQ9Y266 331 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 SNX9Q9Y5X1 595 aa3.67□□□□□ -1.82
TDP1-217ENST00000557782 KIR2DS5A0A0G2JLQ3 304 aa3.66□□□□□ -1.82
TDP1-217ENST00000557782 STMND1H3BQB6 276 aa3.66□□□□□ -1.82
TDP1-217ENST00000557782 KIR2DS3K7RE56 304 aa3.66□□□□□ -1.82
TDP1-217ENST00000557782 SGK1O00141 431 aa3.66□□□□□ -1.82
TDP1-217ENST00000557782 PLK4O00444 970 aa3.66□□□□□ -1.82
TDP1-217ENST00000557782 E2F3O00716 465 aa3.66□□□□□ -1.82
TDP1-217ENST00000557782 MAGEB2O15479 319 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms