RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ADGRF3Q8IZF5 1079 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 DSELQ8IZU8 1212 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 DNAAF3Q8N9W5 541 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 ELMO1Q92556 727 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 TRAPPC9Q96Q05 1148 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 ACTR10Q9NZ32 417 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 CCDC162PA2VCL2 907 aa21.9■■□□□ 1.1
ACTN1-220ENST00000556433 LIN7AO14910 233 aaPredicted RBP21.9■■□□□ 1.1
ACTN1-220ENST00000556433 CYP2A7P20853 494 aa21.9■■□□□ 1.1
ACTN1-220ENST00000556433 STIP1P31948 543 aaKnown RBP21.9■■□□□ 1.1
ACTN1-220ENST00000556433 BRD3Q15059 726 aa21.9■■□□□ 1.1
ACTN1-220ENST00000556433 ATG4AQ8WYN0 398 aa21.9■■□□□ 1.1
ACTN1-220ENST00000556433 SLC7A5P2Q9GIP4 190 aa21.9■■□□□ 1.1
ACTN1-220ENST00000556433 ACTR5Q9H9F9 607 aaPredicted RBP21.9■■□□□ 1.1
ACTN1-220ENST00000556433 UBR5O95071 2799 aaPredicted RBP21.89■■□□□ 1.1
ACTN1-220ENST00000556433 ARGFXA6NJG6 315 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 QSOX1O00391 747 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 GAS8O95995 478 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 FTH1P02794 183 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 PDGFAP04085 211 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 RAB40ALP0C0E4 278 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 MSL3P1P0C860 447 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 RORAP35398 523 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 CCL11P51671 97 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 CDH17Q12864 832 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 CHAF1BQ13112 559 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 ZNF789Q5FWF6 425 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 HOOK3Q86VS8 718 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 GAS2L3Q86XJ1 694 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 ENDOVQ8N8Q3 282 aaKnown RBP21.89■■□□□ 1.09
ACTN1-220ENST00000556433 OR5AR1Q8NGP9 310 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 ETNK1Q9HBU6 452 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 ACSS2Q9NR19 701 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 PCMTD2Q9NV79 361 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 SNX7Q9UNH6 387 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 ICKQ9UPZ9 632 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 PLAAQ9Y263 795 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 ASF1AQ9Y294 204 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 CAPN6Q9Y6Q1 641 aa21.89■■□□□ 1.09
ACTN1-220ENST00000556433 ERI2A8K979 691 aaKnown RBP21.88■■□□□ 1.09
ACTN1-220ENST00000556433 CYSRT1A8MQ03 144 aa21.88■■□□□ 1.09
ACTN1-220ENST00000556433 FOXN2P32314 431 aa21.88■■□□□ 1.09
ACTN1-220ENST00000556433 CPZQ66K79 652 aa21.88■■□□□ 1.09
ACTN1-220ENST00000556433 SPESP1Q6UW49 350 aa21.88■■□□□ 1.09
ACTN1-220ENST00000556433 PACS1Q6VY07 963 aa21.88■■□□□ 1.09
ACTN1-220ENST00000556433 NAPRTQ6XQN6 538 aa21.88■■□□□ 1.09
ACTN1-220ENST00000556433 UNC5AQ6ZN44 842 aa21.88■■□□□ 1.09
ACTN1-220ENST00000556433 HDAC10Q969S8 669 aa21.88■■□□□ 1.09
ACTN1-220ENST00000556433 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.88■■□□□ 1.091e-6■■■■■ 31.4
ACTN1-220ENST00000556433 NLNQ9BYT8 704 aa21.88■■□□□ 1.09
ACTN1-220ENST00000556433 ING2Q9H160 280 aa21.88■■□□□ 1.09
ACTN1-220ENST00000556433 SEC16AO15027 2179 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 HEATR9A2RTY3 570 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 E7EQ34 232 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 LIASO43766 372 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 IFNB1P01574 187 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 OR56A5P0C7T3 313 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 ACADLP28330 430 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 SHMT2P34897 504 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 FDFT1P37268 417 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 MLLT10P55197 1068 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 ITGA1P56199 1179 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 LYPLAL1Q5VWZ2 237 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 PPP1R21Q6ZMI0 780 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 CDHR3Q6ZTQ4 885 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 SYTL1Q8IYJ3 562 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 TBC1D21Q8IYX1 336 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 RNF10Q8N5U6 811 aaKnown RBP21.87■■□□□ 1.09
ACTN1-220ENST00000556433 SPC24Q8NBT2 197 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 TTC1Q99614 292 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 SLC25A23Q9BV35 468 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 IMPACTQ9P2X3 320 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 POLG2Q9UHN1 485 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 TCFL5Q9UL49 500 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 ZNF148Q9UQR1 794 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 TDRKHQ9Y2W6 561 aaKnown RBP21.87■■□□□ 1.09
ACTN1-220ENST00000556433 PIKFYVEQ9Y2I7 2098 aa21.87■■□□□ 1.09
ACTN1-220ENST00000556433 SLC5A10A0PJK1 596 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 E7EVH7 732 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 ZNF749O43361 778 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 OR1I1O60431 355 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 SUN1O94901 812 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 GRIA1P42261 906 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 PTGIRP43119 386 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 PLOD1Q02809 727 aaPredicted RBP21.86■■□□□ 1.09
ACTN1-220ENST00000556433 UBAP2LQ14157 1087 aaKnown RBP21.86■■□□□ 1.09
ACTN1-220ENST00000556433 OASLQ15646 514 aaKnown RBP21.86■■□□□ 1.09
ACTN1-220ENST00000556433 PTCHD3Q3KNS1 767 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 SYTL3Q4VX76 610 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 TSTD2Q5T7W7 516 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 SEL1L2Q5TEA6 688 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 FAM69BQ5VUD6 431 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 TRIM73Q86UV7 250 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 OR13J1Q8NGT2 312 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 ADAMTS17Q8TE56 1095 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 N4BP2L2Q92802 583 aaPredicted RBP21.86■■□□□ 1.09
ACTN1-220ENST00000556433 MIB2Q96AX9 1013 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 FRMD8P1Q9BZ68 369 aaPredicted RBP21.86■■□□□ 1.09
ACTN1-220ENST00000556433 SLC2A6Q9UGQ3 507 aa21.86■■□□□ 1.09
ACTN1-220ENST00000556433 BHMG1C9JSJ3 638 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms