RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 DTX1Q86Y01 620 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 KLHL7Q8IXQ5 586 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 SLC22A15Q8IZD6 547 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 CARFQ8N187 725 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 C17orf53Q8N3J3 647 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-205ENST00000556310 LKAAEAR1Q8TD35 194 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 ASZ1Q8WWH4 475 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 LCN9Q8WX39 176 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 KLHL6Q8WZ60 621 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 UBXN4Q92575 508 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 LPGAT1Q92604 370 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 PANX3Q96QZ0 392 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 FERD3LQ96RJ6 166 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 TCF12Q99081 682 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 TRIM56Q9BRZ2 755 aaKnown RBP11.22□□□□□ -0.61
SLIRP-205ENST00000556310 ZPBPQ9BS86 351 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 HGH1Q9BTY7 390 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 TFB2MQ9H5Q4 396 aaKnown RBP11.22□□□□□ -0.61
SLIRP-205ENST00000556310 PRORYQ9H606 182 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 FBXO8Q9NRD0 319 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 HRASLS2Q9NWW9 162 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 RPS6KL1Q9Y6S9 549 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 LOC400499M0QZD8 3231 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 ZCWPW2A0A1B0GU75 182 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 UBA6A0AVT1 1052 aaPredicted RBP11.21□□□□□ -0.61
SLIRP-205ENST00000556310 OR6C74A6NCV1 312 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 GOLGA8KD6RF30 607 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 GOLGA8TH3BQL2 631 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 GPC4O75487 556 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 USP1O94782 785 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 APOA4P06727 396 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 ITGB6P18564 788 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 NELFEP18615 380 aaKnown RBP11.21□□□□□ -0.61
SLIRP-205ENST00000556310 IVDP26440 423 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 SEPHS1P49903 392 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 ADARP55265 1226 aaKnown RBP11.21□□□□□ -0.61
SLIRP-205ENST00000556310 EIF3BP55884 814 aaKnown RBP11.21□□□□□ -0.61
SLIRP-205ENST00000556310 ETF1P62495 437 aaKnown RBP11.21□□□□□ -0.61
SLIRP-205ENST00000556310 PRKAA1Q13131 559 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 DNAJC21Q5F1R6 531 aaKnown RBP11.21□□□□□ -0.61
SLIRP-205ENST00000556310 NEPROQ6NW34 567 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 ARMC6Q6NXE6 501 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 CYB5D1Q6P9G0 228 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 NAPRTQ6XQN6 538 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 KMT5CQ86Y97 462 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 CILP2Q8IUL8 1156 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 TBC1D21Q8IYX1 336 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 KRT222Q8N1A0 295 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 AGGF1Q8N302 714 aaeCLIP11.21□□□□□ -0.61
SLIRP-205ENST00000556310 OR52E1Q8NGJ3 308 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 OR5AR1Q8NGP9 310 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 OR5K2Q8NHB8 316 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 STAMBPL1Q96FJ0 436 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 SLC41A2Q96JW4 573 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 SIGLEC10Q96LC7 697 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 FCRL3Q96P31 734 aaPredicted RBP11.21□□□□□ -0.61
SLIRP-205ENST00000556310 MAP3K3Q99759 626 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 TRIT1Q9H3H1 467 aaKnown RBP11.21□□□□□ -0.61
SLIRP-205ENST00000556310 SRMSQ9H3Y6 488 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 APMAPQ9HDC9 416 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 INTS10Q9NVR2 710 aaKnown RBP11.21□□□□□ -0.61
SLIRP-205ENST00000556310 POMT2Q9UKY4 750 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 CDYLQ9Y232 598 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 ASF1AQ9Y294 204 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 PCDHB11Q9Y5F2 797 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 MAD1L1Q9Y6D9 718 aa11.21□□□□□ -0.61
SLIRP-205ENST00000556310 SNRNP200O75643 2136 aaKnown RBP11.2□□□□□ -0.62
SLIRP-205ENST00000556310 IGHV5-51A0A0C4DH38 117 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 IQCF5A8MTL0 148 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 H3BMM5 538 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 KPNA5O15131 536 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 POLR1CO15160 346 aaPredicted RBP11.2□□□□□ -0.62
SLIRP-205ENST00000556310 SLCO2B1O94956 709 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 ESR1P03372 595 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 PGAM1P18669 254 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 POLR2CP19387 275 aaPredicted RBP11.2□□□□□ -0.62
SLIRP-205ENST00000556310 AOAHP28039 575 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 SHMT2P34897 504 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 ATP1A2P50993 1020 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 KPNA2P52292 529 aaKnown RBP11.2□□□□□ -0.62
SLIRP-205ENST00000556310 CSE1LP55060 971 aaKnown RBP11.2□□□□□ -0.62
SLIRP-205ENST00000556310 CXADRP78310 365 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 SH3BP2P78314 561 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 HSPA14Q0VDF9 509 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 PRKG2Q13237 762 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 MORF4L2Q15014 288 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 TGIF1Q15583 401 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 LONRF1Q17RB8 773 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 CTSL3PQ5NE16 218 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 ZNF470Q6ECI4 717 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 CENPUQ71F23 418 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 AMIGO1Q86WK6 493 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 LMNTD2Q8IXW0 634 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 PHC3Q8NDX5 983 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 OR4E2Q8NGC2 313 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 SNRNP27Q8WVK2 155 aaKnown RBP11.2□□□□□ -0.62
SLIRP-205ENST00000556310 BIRC8Q96P09 236 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 CCNL2Q96S94 520 aaPredicted RBP11.2□□□□□ -0.62
SLIRP-205ENST00000556310 CTRCQ99895 268 aa11.2□□□□□ -0.62
SLIRP-205ENST00000556310 TRIM51Q9BSJ1 452 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms