RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 OR1L3Q8NH93 324 aa19.13■□□□□ 0.65
PRKCH-219ENST00000555906 TFGQ92734 400 aaPredicted RBP19.13■□□□□ 0.65
PRKCH-219ENST00000555906 CLIP3Q96DZ5 547 aa19.13■□□□□ 0.65
PRKCH-219ENST00000555906 CDKN2AIPNLQ96HQ2 116 aa19.13■□□□□ 0.65
PRKCH-219ENST00000555906 NLNQ9BYT8 704 aa19.13■□□□□ 0.65
PRKCH-219ENST00000555906 ACTR5Q9H9F9 607 aaPredicted RBP19.13■□□□□ 0.65
PRKCH-219ENST00000555906 ACSS2Q9NR19 701 aa19.13■□□□□ 0.65
PRKCH-219ENST00000555906 PCMTD2Q9NV79 361 aa19.13■□□□□ 0.65
PRKCH-219ENST00000555906 RP1L1Q8IWN7 2480 aaPredicted RBP19.13■□□□□ 0.65
PRKCH-219ENST00000555906 ARGFXA6NJG6 315 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 LIN7AO14910 233 aaPredicted RBP19.12■□□□□ 0.65
PRKCH-219ENST00000555906 PSMD3O43242 534 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 NSG1P42857 185 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 PTGIRP43119 386 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 LMAN1P49257 510 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 PGDP52209 483 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 CHAF1BQ13112 559 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 PAPD7Q5XG87 772 aaKnown RBP19.12■□□□□ 0.65
PRKCH-219ENST00000555906 MICALCLQ6ZW33 695 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 SYTL1Q8IYJ3 562 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 ADGRF3Q8IZF5 1079 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 CLDN19Q8N6F1 224 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 SLC35B2Q8TB61 432 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 TRAPPC9Q96Q05 1148 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 DPH2Q9BQC3 489 aaPredicted RBP19.12■□□□□ 0.65
PRKCH-219ENST00000555906 SLC25A23Q9BV35 468 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 ING2Q9H160 280 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 MLXIPLQ9NP71 852 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 ACTR10Q9NZ32 417 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 TCFL5Q9UL49 500 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 ICKQ9UPZ9 632 aa19.12■□□□□ 0.65
PRKCH-219ENST00000555906 MROH6A6NGR9 719 aa19.11■□□□□ 0.65
PRKCH-219ENST00000555906 DDX3YO15523 660 aaKnown RBP19.11■□□□□ 0.65
PRKCH-219ENST00000555906 FTH1P02794 183 aa19.11■□□□□ 0.65
PRKCH-219ENST00000555906 TPH1P17752 444 aa19.11■□□□□ 0.65
PRKCH-219ENST00000555906 ITGA1P56199 1179 aa19.11■□□□□ 0.65
PRKCH-219ENST00000555906 LCN10Q6JVE6 187 aa19.11■□□□□ 0.65
PRKCH-219ENST00000555906 SPESP1Q6UW49 350 aa19.11■□□□□ 0.65
PRKCH-219ENST00000555906 LINC00523Q86TU6 105 aa19.11■□□□□ 0.65
PRKCH-219ENST00000555906 TXLNBQ8N3L3 684 aa19.11■□□□□ 0.65
PRKCH-219ENST00000555906 PHC3Q8NDX5 983 aa19.11■□□□□ 0.65
PRKCH-219ENST00000555906 NRTNQ99748 197 aa19.11■□□□□ 0.65
PRKCH-219ENST00000555906 TMEM121Q9BTD3 319 aa19.11■□□□□ 0.65
PRKCH-219ENST00000555906 SMARCAL1Q9NZC9 954 aa19.11■□□□□ 0.65
PRKCH-219ENST00000555906 PACSIN2Q9UNF0 486 aaPredicted RBP19.11■□□□□ 0.65
PRKCH-219ENST00000555906 R3HDM2Q9Y2K5 976 aaKnown RBP19.11■□□□□ 0.65
PRKCH-219ENST00000555906 SHANK1Q9Y566 2161 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 NUP210LQ5VU65 1888 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 E7EQ34 232 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 CEACAM4O75871 244 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 CAPN1P07384 714 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 HBQ1P09105 142 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 PVRP15151 417 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 MSNP26038 577 aaKnown RBP19.1■□□□□ 0.65
PRKCH-219ENST00000555906 FOXN2P32314 431 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 SHMT2P34897 504 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 MLLT10P55197 1068 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 NCF4Q15080 339 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 CDHR3Q6ZTQ4 885 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 FAM26EQ8N5C1 309 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 C19orf47Q8N9M1 422 aaKnown RBP19.1■□□□□ 0.65
PRKCH-219ENST00000555906 ALS2CR12Q96Q35 445 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 XKR8Q9H6D3 395 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 PIH1D1Q9NWS0 290 aaKnown RBP19.1■□□□□ 0.65
PRKCH-219ENST00000555906 SERTAD3Q9UJW9 196 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 PCDHGB7Q9Y5F8 929 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 PCM1Q15154 2024 aa19.1■□□□□ 0.65
PRKCH-219ENST00000555906 SPTBN1Q01082 2364 aaKnown RBP19.1■□□□□ 0.65
PRKCH-219ENST00000555906 ERI2A8K979 691 aaKnown RBP19.09■□□□□ 0.65
PRKCH-219ENST00000555906 C9J4A7 227 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 TMEM63AO94886 807 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 FTCDO95954 541 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 KIF5AQ12840 1032 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 PRKG2Q13237 762 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 ZNF385CQ66K41 422 aaPredicted RBP19.09■□□□□ 0.65
PRKCH-219ENST00000555906 TMEM139Q8IV31 216 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 OR5AR1Q8NGP9 310 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 ELMO1Q92556 727 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.09■□□□□ 0.65
PRKCH-219ENST00000555906 BAG1Q99933 345 aaPredicted RBP19.09■□□□□ 0.65
PRKCH-219ENST00000555906 SLC7A5P2Q9GIP4 190 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 CHRNA10Q9GZZ6 450 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 KLHL25Q9H0H3 589 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 ASF1AQ9Y294 204 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 PADI2Q9Y2J8 665 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 PRSS21Q9Y6M0 314 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 PCSK5Q92824 1860 aa19.09■□□□□ 0.65
PRKCH-219ENST00000555906 TCRBV7S2A1N4TA0A589 114 aa19.08■□□□□ 0.64
PRKCH-219ENST00000555906 UGT2B7P16662 529 aa19.08■□□□□ 0.64
PRKCH-219ENST00000555906 ACADLP28330 430 aa19.08■□□□□ 0.64
PRKCH-219ENST00000555906 PLOD1Q02809 727 aaPredicted RBP19.08■□□□□ 0.64
PRKCH-219ENST00000555906 CDH17Q12864 832 aa19.08■□□□□ 0.64
PRKCH-219ENST00000555906 PTCHD3Q3KNS1 767 aa19.08■□□□□ 0.64
PRKCH-219ENST00000555906 SYTL3Q4VX76 610 aa19.08■□□□□ 0.64
PRKCH-219ENST00000555906 HOOK3Q86VS8 718 aa19.08■□□□□ 0.64
PRKCH-219ENST00000555906 TBC1D21Q8IYX1 336 aa19.08■□□□□ 0.64
PRKCH-219ENST00000555906 GPR135Q8IZ08 494 aa19.08■□□□□ 0.64
PRKCH-219ENST00000555906 OR5K2Q8NHB8 316 aa19.08■□□□□ 0.64
PRKCH-219ENST00000555906 HES6Q96HZ4 224 aa19.08■□□□□ 0.64
PRKCH-219ENST00000555906 C17orf62Q9BQA9 187 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms