RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	CRKL	P46109	303 aa	Known RBP	4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	ARCN1	P48444	511 aa	Known RBP	4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	LHX1	P48742	406 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	MLLT10	P55197	1068 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	TPD52	P55327	224 aa	Predicted RBP	4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	SEC61A1	P61619	476 aa	Known RBP	4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	REL	Q04864	619 aa	Predicted RBP	4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	PRKAA1	Q13131	559 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	SLMAP	Q14BN4	828 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	MFSD12	Q6NUT3	480 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	PTOV1	Q86YD1	416 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	FAM114A1	Q8IWE2	563 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	NUP93	Q8N1F7	819 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	GPATCH11	Q8N954	259 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	L3MBTL4	Q8NA19	623 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	PPFIBP2	Q8ND30	876 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	C9orf43	Q8TAL5	461 aa	Predicted RBP	4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	AFAP1L1	Q8TED9	768 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	HES6	Q96HZ4	224 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	MLPH	Q9BV36	600 aa	Predicted RBP	4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	DNAI2	Q9GZS0	605 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	CSTL1	Q9H114	145 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	GAREM1	Q9H706	876 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	RNF150	Q9ULK6	438 aa		4.16	□□□□□ -1.74
KTN1-222	ENST00000555506	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	DNM1L	O00429	736 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	IGHV2-70	P01814	119 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	TFAP2A	P05549	437 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	LIPF	P07098	398 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	KRT19	P08727	400 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	DAO	P14920	347 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	ZNF23	P17027	643 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	AZGP1	P25311	298 aa	Known RBP	4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	PTPN3	P26045	913 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	CCKBR	P32239	447 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	YWHAH	Q04917	246 aa	Predicted RBP	4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	NFE2L1	Q14494	772 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	MEP1B	Q16820	701 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	TYSND1	Q2T9J0	566 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	TWISTNB	Q3B726	338 aa	Predicted RBP	4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	NHSL2	Q5HYW2	709 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	MDH1B	Q5I0G3	518 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	NDUFAF5	Q5TEU4	345 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	SHE	Q5VZ18	495 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	PLXDC2	Q6UX71	529 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	LINGO4	Q6UY18	593 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	C9orf47	Q6ZRZ4	202 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	OTOA	Q7RTW8	1153 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	CCDC91	Q7Z6B0	441 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	CCDC170	Q8IYT3	715 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	IQCF1	Q8N6M8	205 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	TMCO5A	Q8N6Q1	288 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	B4GALNT2	Q8NHY0	566 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	OCC1	Q8TAD7	63 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	GRAPL	Q8TC17	118 aa	Predicted RBP	4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	SSMEM1	Q8WWF3	244 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	SYN2	Q92777	582 aa	Predicted RBP	4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	ABHD8	Q96I13	439 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	INPP5K	Q9BT40	448 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	TRPC7	Q9HCX4	862 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506		Q9N2K0	584 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	TBC1D7	Q9P0N9	293 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506	KCNK7	Q9Y2U2	307 aa		4.15	□□□□□ -1.75
KTN1-222	ENST00000555506		A0A0G2JNG1	304 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506		A4D1N5	150 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	NEMP2	A6NFY4	417 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	PRR32	B1ATL7	298 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	IFIT3	O14879	490 aa	Known RBP	4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	AP5Z1	O43299	807 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	ACSL3	O95573	720 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	WDPCP	O95876	746 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	VIM	P08670	466 aa	Known RBP	4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	MCC	P23508	829 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	MAPK12	P53778	367 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	SNTA1	Q13424	505 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	KIR2DS5	Q14953	304 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	UGCG	Q16739	394 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	ODF2	Q5BJF6	829 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	PACS1	Q6VY07	963 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	CREB3L2	Q70SY1	520 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	TMPRSS11B	Q86T26	416 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	COMMD2	Q86X83	199 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	SFR1	Q86XK3	245 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	GPALPP1	Q8IXQ4	340 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	CPSF7	Q8N684	471 aa	Known RBP	4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	ZNF441	Q8N8Z8	693 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	ATAD1	Q8NBU5	361 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	KCNH5	Q8NCM2	988 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	SPATA3	Q8NHX4	192 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	FIBIN	Q8TAL6	211 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	RNF128	Q8TEB7	428 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	GRK7	Q8WTQ7	553 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	ADGRG7	Q96K78	797 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	FN3K	Q9H479	309 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	ACKR4	Q9NPB9	350 aa		4.14	□□□□□ -1.75
KTN1-222	ENST00000555506	CDH7	Q9ULB5	785 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms