RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 OR5K2Q8NHB8 316 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 ZNF778Q96MU6 729 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 KIFC1Q9BW19 673 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 LHX9Q9NQ69 397 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 CHRAC1Q9NRG0 131 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 CATSPERZQ9NTU4 200 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 SLC2A6Q9UGQ3 507 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 IL17BQ9UHF5 180 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 LNPEPQ9UIQ6 1025 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 ASF1AQ9Y294 204 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 PRSS21Q9Y6M0 314 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 GCN1Q92616 2671 aaKnown RBP11.49□□□□□ -0.57
VRK1-204ENST00000555351 BHMG1C9JSJ3 638 aaPredicted RBP11.48□□□□□ -0.57
VRK1-204ENST00000555351 BTN3A3O00478 584 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 BTN3A1O00481 513 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 PRMT5O14744 637 aaPredicted RBP11.48□□□□□ -0.57
VRK1-204ENST00000555351 CD3EAPO15446 510 aaKnown RBP11.48□□□□□ -0.57
VRK1-204ENST00000555351 GPC4O75487 556 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 RPN2P04844 631 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 ZSCAN5DPP0CG00 497 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 RPS3P23396 243 aaKnown RBP eCLIP11.48□□□□□ -0.573e-7■■■□□ 17.7
VRK1-204ENST00000555351 PREPP48147 710 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 BASP1P80723 227 aaKnown RBP11.48□□□□□ -0.57
VRK1-204ENST00000555351 CYP1B1Q16678 543 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 UNC5DQ6UXZ4 953 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 PHC3Q8NDX5 983 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 APOBEC4Q8WW27 367 aaKnown RBP11.48□□□□□ -0.57
VRK1-204ENST00000555351 PANX3Q96QZ0 392 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 TCF12Q99081 682 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 AP1M1Q9BXS5 423 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 SLC25A18Q9H1K4 315 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 SOHLH2Q9NX45 425 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 CROTQ9UKG9 612 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 MRFAP1Q9Y605 127 aa11.48□□□□□ -0.57
VRK1-204ENST00000555351 MAGEB16A2A368 324 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 PIPSLA2A3N6 862 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 CCDC78A2IDD5 438 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 GSAPA4D1B5 854 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 SLC9B1P1A6NJY1 282 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 J3QKU1 62 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 CES2O00748 559 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 PFDN6O15212 129 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 NKX2-8O15522 239 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 OR1I1O60431 355 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 SCRG1O75711 98 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 SLCO2B1O94956 709 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 TIAF1O95411 115 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 APOA4P06727 396 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 HBQ1P09105 142 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 FAM87AP0C7U9 286 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 MLNP12872 115 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 F8A1P23610 371 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 AOAHP28039 575 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 CXCR5P32302 372 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 ADARP55265 1226 aaKnown RBP11.47□□□□□ -0.57
VRK1-204ENST00000555351 POLE2P56282 527 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 SESN2P58004 480 aaPredicted RBP11.47□□□□□ -0.57
VRK1-204ENST00000555351 KCNAB2Q13303 367 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 DNASE1L3Q13609 305 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 SEMA3AQ14563 771 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 KCNAB1Q14722 419 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 TMED2Q15363 201 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 RNF187Q5TA31 235 aaPredicted RBP11.47□□□□□ -0.57
VRK1-204ENST00000555351 IZUMO3Q5VZ72 239 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 MRNIPQ6NTE8 343 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 SPESP1Q6UW49 350 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 PRUNE1Q86TP1 453 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 TMEM126BQ8IUX1 230 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 UNC5BQ8IZJ1 945 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 OR5AR1Q8NGP9 310 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 CPT1BQ92523 772 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 TCTN2Q96GX1 697 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 ELMO2Q96JJ3 720 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 TRAPPC9Q96Q05 1148 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 DPH2Q9BQC3 489 aaPredicted RBP11.47□□□□□ -0.57
VRK1-204ENST00000555351 HGH1Q9BTY7 390 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 ACTR10Q9NZ32 417 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 GNPTGQ9UJJ9 305 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 SERTAD3Q9UJW9 196 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 SOX13Q9UN79 622 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 ICKQ9UPZ9 632 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 CDYLQ9Y232 598 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 PIEZO2Q9H5I5 2752 aa11.47□□□□□ -0.57
VRK1-204ENST00000555351 ZNF462Q96JM2 2506 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 H3BMM5 538 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 ZSCAN12O43309 604 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 CREG1O75629 220 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 FKBP9O95302 570 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 KLK3P07288 261 aaPredicted RBP11.46□□□□□ -0.57
VRK1-204ENST00000555351 RAB40ALP0C0E4 278 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 PAMP19021 973 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 PTPN4P29074 926 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 OAS2P29728 719 aaKnown RBP11.46□□□□□ -0.57
VRK1-204ENST00000555351 CCR7P32248 378 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 KCNJ1P48048 391 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 PRKG2Q13237 762 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 KCNJ11Q14654 390 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 KIR2DS3Q14952 304 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 GPR19Q15760 415 aa11.46□□□□□ -0.57
VRK1-204ENST00000555351 KYNUQ16719 465 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms