RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ARHGAP40Q5TG30 622 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 ANKRD22Q5VYY1 191 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 MRNIPQ6NTE8 343 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 LRRC6Q86X45 466 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 GSPT2Q8IYD1 628 aaKnown RBP12.71□□□□□ -0.37
SHMT2-211ENST00000554310 LCN9Q8WX39 176 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 TFGQ92734 400 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-211ENST00000554310 SLCO2A1Q92959 643 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 SLC41A2Q96JW4 573 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 FERD3LQ96RJ6 166 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 CTRCQ99895 268 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 TFB2MQ9H5Q4 396 aaKnown RBP12.71□□□□□ -0.37
SHMT2-211ENST00000554310 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 SAMD15Q9P1V8 674 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 MARCH4Q9P2E8 410 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-211ENST00000554310 GNPTGQ9UJJ9 305 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 UBA6A0AVT1 1052 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-211ENST00000554310 FAM187AA6NFU0 413 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 PFDN6O15212 129 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 VAPBO95292 243 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 APOA4P06727 396 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 RPS3P23396 243 aaKnown RBP eCLIP12.7□□□□□ -0.386e-7■■□□□ 13.8
SHMT2-211ENST00000554310 OAS2P29728 719 aaKnown RBP12.7□□□□□ -0.38
SHMT2-211ENST00000554310 RHDQ02161 417 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 DHX34Q14147 1143 aaKnown RBP12.7□□□□□ -0.38
SHMT2-211ENST00000554310 TMED2Q15363 201 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 PPP1R7Q15435 360 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 KCTD19Q17RG1 926 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-211ENST00000554310 TYSND1Q2T9J0 566 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 CASC4Q6P4E1 433 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 CAND1Q86VP6 1230 aaKnown RBP12.7□□□□□ -0.38
SHMT2-211ENST00000554310 SLC22A15Q8IZD6 547 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 OTUD6BQ8N6M0 293 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 OR52E1Q8NGJ3 308 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 ASZ1Q8WWH4 475 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 SEC14L1Q92503 715 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 NKD1Q969G9 470 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 MFSD3Q96ES6 412 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 RUNDC3BQ96NL0 473 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 SERPINB12Q96P63 405 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 PANX3Q96QZ0 392 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 OR6C1Q96RD1 312 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 MAP3K3Q99759 626 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 HGH1Q9BTY7 390 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 DDX47Q9H0S4 455 aaKnown RBP12.7□□□□□ -0.38
SHMT2-211ENST00000554310 TRIT1Q9H3H1 467 aaKnown RBP12.7□□□□□ -0.38
SHMT2-211ENST00000554310 SRMSQ9H3Y6 488 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 APMAPQ9HDC9 416 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 MED4Q9NPJ6 270 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 PILRAQ9UKJ1 303 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 POMT2Q9UKY4 750 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 ASF1AQ9Y294 204 aa12.7□□□□□ -0.38
SHMT2-211ENST00000554310 TMEM184BQ9Y519 407 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-211ENST00000554310 IGHV5-51A0A0C4DH38 117 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 FAM237BA0A1B0GVD1 139 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 MAGEB16A2A368 324 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 SDR42E2A6NKP2 422 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 KDM1AO60341 852 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 RAD1O60671 282 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 AVILO75366 819 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 NDUFS3O75489 264 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 STK17BO94768 372 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 ZBTB11O95625 1053 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-211ENST00000554310 OGNP20774 298 aaKnown RBP12.69□□□□□ -0.38
SHMT2-211ENST00000554310 ACADLP28330 430 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 CCR7P32248 378 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 SHMT2P34897 504 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 MAGEA3P43357 314 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 CARSP49589 748 aaKnown RBP12.69□□□□□ -0.38
SHMT2-211ENST00000554310 ARL4DP49703 201 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 SH3BP2P78314 561 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 MRPS25P82663 173 aaKnown RBP12.69□□□□□ -0.38
SHMT2-211ENST00000554310 TUBB3Q13509 450 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 PTK6Q13882 451 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 MAP7Q14244 749 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.69□□□□□ -0.38
SHMT2-211ENST00000554310 DNAJC21Q5F1R6 531 aaKnown RBP12.69□□□□□ -0.38
SHMT2-211ENST00000554310 PTRHD1Q6GMV3 140 aaKnown RBP12.69□□□□□ -0.38
SHMT2-211ENST00000554310 SDCCAG8Q86SQ7 713 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-211ENST00000554310 LDB1Q86U70 411 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-211ENST00000554310 VASH2Q86V25 355 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 PPIL6Q8IXY8 311 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 TBC1D21Q8IYX1 336 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 CACNA2D3Q8IZS8 1091 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 NLGN4XQ8N0W4 816 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 MREGQ8N565 214 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 IL22RA1Q8N6P7 574 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 NAT8LQ8N9F0 302 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 SIDT2Q8NBJ9 832 aaKnown RBP12.69□□□□□ -0.38
SHMT2-211ENST00000554310 LSM14AQ8ND56 463 aaKnown RBP12.69□□□□□ -0.38
SHMT2-211ENST00000554310 NLGN4YQ8NFZ3 816 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-211ENST00000554310 OR4E2Q8NGC2 313 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 OR5K2Q8NHB8 316 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 LKAAEAR1Q8TD35 194 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 TCF12Q99081 682 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 ULBP3Q9BZM4 244 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 SPRY4Q9C004 299 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 RAB17Q9H0T7 212 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 P2RY12Q9H244 342 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 FAM114A2Q9NRY5 505 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms