RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 ACADLP28330 430 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 PRDX3P30048 256 aaKnown RBP6.41□□□□□ -1.38
SLIRP-203ENST00000554074 FOXN2P32314 431 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 SHMT2P34897 504 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 RORAP35398 523 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 CD97P48960 835 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 CDKN1CP49918 316 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-203ENST00000554074 GDF10P55107 478 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 CDH17Q12864 832 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 SPARCL1Q14515 664 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 POU6F1Q14863 301 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 GPR19Q15760 415 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 DBN1Q16643 649 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 ZRANB3Q5FWF4 1079 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 ZNF789Q5FWF6 425 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 PLEKHS1Q5SXH7 462 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 LYPLAL1Q5VWZ2 237 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 ASB18Q6ZVZ8 466 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 NLRP9Q7RTR0 991 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 TAS2R42Q7RTR8 314 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 AMIGO1Q86WK6 493 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 TBC1D21Q8IYX1 336 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 LILRA3Q8N6C8 439 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-203ENST00000554074 SLC38A9Q8NBW4 561 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 TRIM58Q8NG06 486 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 OR52E1Q8NGJ3 308 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 ADAMTS17Q8TE56 1095 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 TFGQ92734 400 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-203ENST00000554074 MR1Q95460 341 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.41□□□□□ -1.38
SLIRP-203ENST00000554074 SGSM3Q96HU1 749 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 FERD3LQ96RJ6 166 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 RANBP9Q96S59 729 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 NLNQ9BYT8 704 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 FAM96AQ9H5X1 160 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 AKIRIN1Q9H9L7 192 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-203ENST00000554074 SOHLH2Q9NX45 425 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 FAM8A1Q9UBU6 413 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 POLG2Q9UHN1 485 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 SERTAD3Q9UJW9 196 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 TLK1Q9UKI8 766 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 FARSAQ9Y285 508 aaKnown RBP6.41□□□□□ -1.38
SLIRP-203ENST00000554074 R3HDM2Q9Y2K5 976 aaKnown RBP6.41□□□□□ -1.38
SLIRP-203ENST00000554074 PCDHGB7Q9Y5F8 929 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 USP9YO00507 2555 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-203ENST00000554074 ZGRF1Q86YA3 2104 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 SLC5A10A0PJK1 596 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 HEATR9A2RTY3 570 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 GSAPA4D1B5 854 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 TMEM150CB9EJG8 249 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 E7EQ34 232 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 H3BMH7 237 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 CCL22O00626 93 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 KDM1AO60341 852 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 CEACAM4O75871 244 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 GAS8O95995 478 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 CAPN1P07384 714 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 CD63P08962 238 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 ST6GAL1P15907 406 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 TPH1P17752 444 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 CYP2A7P20853 494 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 ADRA1DP25100 572 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 PDHA2P29803 388 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 FDFT1P37268 417 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 PREPP48147 710 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 ARCN1P48444 511 aaKnown RBP6.4□□□□□ -1.38
SLIRP-203ENST00000554074 ITGA1P56199 1179 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 ACVR1Q04771 509 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 ABRQ12979 859 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 IL10RAQ13651 578 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 OASLQ15646 514 aaKnown RBP6.4□□□□□ -1.38
SLIRP-203ENST00000554074 DNAJC21Q5F1R6 531 aaKnown RBP6.4□□□□□ -1.38
SLIRP-203ENST00000554074 COLEC12Q5KU26 742 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 ZNF385CQ66K41 422 aaPredicted RBP6.4□□□□□ -1.38
SLIRP-203ENST00000554074 FAM199XQ6PEV8 388 aaPredicted RBP6.4□□□□□ -1.38
SLIRP-203ENST00000554074 AFTPHQ6ULP2 937 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 SPESP1Q6UW49 350 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 FAM198BQ6UWH4 519 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 TMEM135Q86UB9 458 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 HPS6Q86YV9 775 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 LURAP1LQ8IV03 231 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 PIANPQ8IYJ0 282 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 SYTL1Q8IYJ3 562 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 ADGRF3Q8IZF5 1079 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 CLDN19Q8N6F1 224 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 TEX19Q8NA77 164 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 OR13J1Q8NGT2 312 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 OR1L3Q8NH93 324 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 OR5K2Q8NHB8 316 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 PROKR1Q8TCW9 393 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 NAT14Q8WUY8 206 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 MIB2Q96AX9 1013 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 TCTN2Q96GX1 697 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 PPM1MQ96MI6 270 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 TRAPPC9Q96Q05 1148 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 RUFY1Q96T51 708 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 TTC1Q99614 292 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 C17orf62Q9BQA9 187 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 DESI2Q9BSY9 194 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 TMEM121Q9BTD3 319 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms