RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 EML4Q9HC35 981 aaKnown RBP10.22□□□□□ -0.77
TMEM55B-205ENST00000554028 GPR27Q9NS67 375 aa10.22□□□□□ -0.77
TMEM55B-205ENST00000554028 THAP1Q9NVV9 213 aa10.22□□□□□ -0.77
TMEM55B-205ENST00000554028 DNAJC28Q9NX36 388 aa10.22□□□□□ -0.77
TMEM55B-205ENST00000554028 WWOXQ9NZC7 414 aa10.22□□□□□ -0.77
TMEM55B-205ENST00000554028 PSMD13Q9UNM6 376 aa10.22□□□□□ -0.77
TMEM55B-205ENST00000554028 DOLKQ9UPQ8 538 aa10.22□□□□□ -0.77
TMEM55B-205ENST00000554028 ANGPTL3Q9Y5C1 460 aa10.22□□□□□ -0.77
TMEM55B-205ENST00000554028 PCDHGA2Q9Y5H1 932 aa10.22□□□□□ -0.77
TMEM55B-205ENST00000554028 COLEC10Q9Y6Z7 277 aa10.22□□□□□ -0.77
TMEM55B-205ENST00000554028 OR5K4A6NMS3 321 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 ZNF839A8K0R7 811 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 GIPC1O14908 333 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 HRO43593 1189 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 NPHS1O60500 1241 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 SUPT7LO94864 414 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 HSPA4LO95757 839 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 CSF2P04141 144 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 SBK3P0C264 359 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 SP9P0CG40 484 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 JUNDP17535 347 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 ITPKAP23677 461 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 RPL10P27635 214 aaKnown RBP10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 NDUFS1P28331 727 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 HSD17B2P37059 387 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 ACTR1BP42025 376 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 SLC1A6P48664 564 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 CSNK1EP49674 416 aaKnown RBP10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 NXPH1P58417 271 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 ACTR1AP61163 376 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 HNRNPKP61978 463 aaKnown RBP eCLIP10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 HERVK_113P63132 956 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 EIF2B5Q13144 721 aaKnown RBP10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 ELOCQ15369 112 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 UAP1L1Q3KQV9 507 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 ANKS6Q68DC2 871 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 METTL2BQ6P1Q9 378 aaKnown RBP10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 WASH2PQ6VEQ5 465 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 FAM83HQ6ZRV2 1179 aaPredicted RBP10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 TAF8Q7Z7C8 310 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 CRLF3Q8IUI8 442 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 HOMEZQ8IX15 550 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 SLC22A18ASQ8N1D0 253 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 SDR16C5Q8N3Y7 309 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 AFAP1L2Q8N4X5 818 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 FBXO15Q8NCQ5 510 aaPredicted RBP10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 PHC3Q8NDX5 983 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 RAD51AP1Q96B01 352 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 GRAMD1AQ96CP6 724 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 ZC3H10Q96K80 434 aaKnown RBP10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 C12orf66Q96MD2 445 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 FERD3LQ96RJ6 166 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 TRMOQ9BU70 441 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 ERVK-6Q9BXR3 956 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 TMEM168Q9H0V1 697 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 OR52A5Q9H2C5 316 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 WASH6PQ9NQA3 447 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 SPASTQ9UBP0 616 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 GULP1Q9UBP9 304 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 APOBEC3BQ9UH17 382 aaKnown RBP10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 POLG2Q9UHN1 485 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 LNPEPQ9UIQ6 1025 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 ADAMTS6Q9UKP5 1117 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 IKZF3Q9UKT9 509 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 PDE10AQ9Y233 779 aa10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 PCYT1BQ9Y5K3 369 aaPredicted RBP10.21□□□□□ -0.77
TMEM55B-205ENST00000554028 NEMP2A6NFY4 417 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 SCAMP1O15126 338 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 KLK8O60259 260 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 SHOX2O60902 331 aaPredicted RBP10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 C1orf105O95561 183 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 MLYCDO95822 493 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 WNT1P04628 370 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 FGF3P11487 239 aaPredicted RBP10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 MTHFD2P13995 350 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 ACADLP28330 430 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 EEF1DP29692 281 aaKnown RBP10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 HOXD12P35452 270 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 PIK3CGP48736 1102 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 ABCE1P61221 599 aaKnown RBP10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 BST1Q10588 318 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 SRSF5Q13243 272 aaKnown RBP10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 SETDB1Q15047 1291 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 PHKG1Q16816 387 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 PPP1R3AQ16821 1122 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 ZNF542PQ5EBM4 170 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 ZNF678Q5SXM1 525 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 TPRG1LQ5T0D9 272 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 CAPRIN2Q6IMN6 1127 aaKnown RBP10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 SLC30A9Q6PML9 568 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 ABRAXAS1Q6UWZ7 409 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 PRR23BQ6ZRT6 265 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 ZCCHC23Q6ZST2 131 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 GKN2Q86XP6 184 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 SYT12Q8IV01 421 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 DCUN1D3Q8IWE4 304 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 TBC1D21Q8IYX1 336 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 PDPRQ8NCN5 879 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 OR9A1PQ8NGU1 263 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 C1orf216Q8TAB5 229 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms