RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PRAMEP78395 509 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 HSD11B2P80365 405 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 ERV3-1Q14264 604 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 IL11RAQ14626 422 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 ZNF789Q5FWF6 425 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 ARMC6Q6NXE6 501 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 UNC5AQ6ZN44 842 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 ZNF605Q86T29 641 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 AMIGO1Q86WK6 493 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 PTRH1Q86Y79 214 aaKnown RBP17.67■□□□□ 0.42
SHMT2-206ENST00000553529 ESX1Q8N693 406 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 OR1L3Q8NH93 324 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 HEXDCQ8WVB3 486 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 ZPBPQ9BS86 351 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 FAM60AQ9NP50 221 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 CATSPERZQ9NTU4 200 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 ACTR10Q9NZ32 417 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 GALPQ9UBC7 116 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 ASF1AQ9Y294 204 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 COLEC10Q9Y6Z7 277 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 FASNP49327 2511 aaKnown RBP17.67■□□□□ 0.42
SHMT2-206ENST00000553529 SNRNP200O75643 2136 aaKnown RBP17.66■□□□□ 0.42
SHMT2-206ENST00000553529 ITGB2P05107 769 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 ARL4DP49703 201 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 HSPA14Q0VDF9 509 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 GPS1Q13098 491 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 KCNJ11Q14654 390 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 CCSMST1Q4G0I0 132 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.66■□□□□ 0.42
SHMT2-206ENST00000553529 SYTL3Q4VX76 610 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 FASTKD1Q53R41 847 aaKnown RBP17.66■□□□□ 0.42
SHMT2-206ENST00000553529 PCID2Q5JVF3 399 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 CTSL3PQ5NE16 218 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 KLHL35Q6PF15 583 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 CDHR3Q6ZTQ4 885 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 CFAP61Q8NHU2 1237 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 TFB2MQ9H5Q4 396 aaKnown RBP17.66■□□□□ 0.42
SHMT2-206ENST00000553529 LHX9Q9NQ69 397 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 EIF2B3Q9NR50 452 aaKnown RBP17.66■□□□□ 0.42
SHMT2-206ENST00000553529 BOD1L1Q8NFC6 3051 aa17.66■□□□□ 0.42
SHMT2-206ENST00000553529 PIEZO2Q9H5I5 2752 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 SPTBP11277 2137 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 GOLGA6L3A6NEY3 463 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 B8ZZF3 427 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 TMEM150CB9EJG8 249 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 LIN7AO14910 233 aaPredicted RBP17.65■□□□□ 0.42
SHMT2-206ENST00000553529 CD3EAPO15446 510 aaKnown RBP17.65■□□□□ 0.42
SHMT2-206ENST00000553529 ZBTB11O95625 1053 aaPredicted RBP17.65■□□□□ 0.42
SHMT2-206ENST00000553529 UGT2B7P16662 529 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 NDUFS1P28331 727 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 CD151P48509 253 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 IL10RAQ13651 578 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 GRB7Q14451 532 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 BORAQ6PGQ7 559 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 PRICKLE2Q7Z3G6 844 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 CAND1Q86VP6 1230 aaKnown RBP17.65■□□□□ 0.42
SHMT2-206ENST00000553529 TMEM126BQ8IUX1 230 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 RASGEF1CQ8N431 466 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 CPT1BQ92523 772 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 KIAA1143Q96AT1 154 aaPredicted RBP17.65■□□□□ 0.42
SHMT2-206ENST00000553529 TRAPPC9Q96Q05 1148 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 OR2A14Q96R47 310 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 P2RY12Q9H244 342 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 PDE7BQ9NP56 450 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 ZNF71Q9NQZ8 489 aaPredicted RBP17.65■□□□□ 0.42
SHMT2-206ENST00000553529 BTRCQ9Y297 605 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 NEU2Q9Y3R4 380 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 HEBP2Q9Y5Z4 205 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 NFS1Q9Y697 457 aa17.65■□□□□ 0.42
SHMT2-206ENST00000553529 CDC14CA4D256 554 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 NRP2O60462 931 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 SCRG1O75711 98 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 DNAJB5O75953 348 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 VAPBO95292 243 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 GAS8O95995 478 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 KRT14P02533 472 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 FTH1P02794 183 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 OR56A5P0C7T3 313 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 TCN2P20062 427 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 BDKRB1P46663 353 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 TUBB4BP68371 445 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 PRKAA1Q13131 559 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 RPA4Q13156 261 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 DNASE1L3Q13609 305 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 LAMB3Q13751 1172 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 TUBB2AQ13885 445 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 MAP7Q14244 749 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 LINC01555Q8NAE3 123 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 ZFPM2Q8WW38 1151 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 MAGOHBQ96A72 148 aaKnown RBP17.64■□□□□ 0.41
SHMT2-206ENST00000553529 CD180Q99467 661 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 MENTQ9BUN1 341 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 TUBB2BQ9BVA1 445 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 PITPNM3Q9BZ71 974 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 MVB12BQ9H7P6 319 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 VPS37BQ9H9H4 285 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 STARD5Q9NSY2 213 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 RIMKLBQ9ULI2 386 aa17.64■□□□□ 0.41
SHMT2-206ENST00000553529 KLHL33A6NCF5 533 aa17.63■□□□□ 0.41
SHMT2-206ENST00000553529 SLC28A2O43868 658 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms