RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 CEP70Q8NHQ1 597 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 TWIST2Q8WVJ9 160 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 C19orf60Q96EN9 201 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 PTCD3Q96EY7 689 aaKnown RBP12.4□□□□□ -0.42
CACNB3-223ENST00000552480 SHDQ96IW2 340 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 NSL1Q96IY1 281 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 CCDC138Q96M89 665 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 APOOQ9BUR5 198 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 DPEP2Q9H4A9 486 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 NOL11Q9H8H0 719 aaKnown RBP12.4□□□□□ -0.42
CACNB3-223ENST00000552480 RMI1Q9H9A7 625 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 LMAN1LQ9HAT1 526 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 LTB4R2Q9NPC1 389 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 WNT16Q9UBV4 365 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 ZNF225Q9UK10 706 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 OR1A2Q9Y585 309 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 ANGPTL3Q9Y5C1 460 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 DNAJC15Q9Y5T4 150 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 BRWD1Q9NSI6 2320 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 PRR5-ARHGAP8B1AHC4 643 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 CACNB4O00305 520 aaPredicted RBP12.39□□□□□ -0.43
CACNB3-223ENST00000552480 SLC22A2O15244 555 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 OR4F21O95013 312 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 CBX6O95503 412 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 CHEK2O96017 543 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 ENO1P06733 434 aaKnown RBP12.39□□□□□ -0.43
CACNB3-223ENST00000552480 EPB42P16452 691 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 AOC1P19801 751 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 CALB2P22676 271 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 PRDX3P30048 256 aaKnown RBP12.39□□□□□ -0.43
CACNB3-223ENST00000552480 ACSL1P33121 698 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 BDKRB1P46663 353 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 CCNG1P51959 295 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 FOXA1P55317 472 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 STARD6P59095 220 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 KIAA1024LP59773 190 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 ERVPABLB-1P60509 514 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 ZP2Q05996 745 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 TRAF3Q13114 568 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 NFE2L1Q14494 772 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.39□□□□□ -0.43
CACNB3-223ENST00000552480 UNC5DQ6UXZ4 953 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 FAM83HQ6ZRV2 1179 aaPredicted RBP12.39□□□□□ -0.43
CACNB3-223ENST00000552480 AMZ2Q86W34 360 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 TREML1Q86YW5 311 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 HOMEZQ8IX15 550 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 KLHDC8AQ8IYD2 350 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 PGBD3Q8N328 593 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 CPSF7Q8N684 471 aaKnown RBP12.39□□□□□ -0.43
CACNB3-223ENST00000552480 FLCNQ8NFG4 579 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 OR52B6Q8NGF0 335 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 CFAP61Q8NHU2 1237 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 ATL1Q8WXF7 558 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 ATP6V1E2Q96A05 226 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 KCNA7Q96RP8 456 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 OR52A5Q9H2C5 316 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 SLC32A1Q9H598 525 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 ZNF385DQ9H6B1 395 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 IPPKQ9H8X2 491 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 FZD3Q9NPG1 666 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 CD93Q9NPY3 652 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 KLC4Q9NSK0 619 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 EBF1Q9UH73 591 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 TRPS1Q9UHF7 1281 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 TAGLN3Q9UI15 199 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 LNPEPQ9UIQ6 1025 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 FBXL21Q9UKT6 434 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 SLC17A4Q9Y2C5 497 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 PCYT1BQ9Y5K3 369 aaPredicted RBP12.39□□□□□ -0.43
CACNB3-223ENST00000552480 ST14Q9Y5Y6 855 aa12.39□□□□□ -0.43
CACNB3-223ENST00000552480 TRIOBPQ9H2D6 2365 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 KANSL1LA0AUZ9 987 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 KRBA1A5PL33 1030 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 CFAP73A6NFT4 308 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 C10orf142B7Z368 130 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 FPGTO14772 594 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 PIP5K1BO14986 540 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 SLC31A1O15431 190 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 VPS4BO75351 444 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 KATNA1O75449 491 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 C1orf105O95561 183 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 SEMA4FO95754 770 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 ESRRAP11474 423 aaPredicted RBP12.38□□□□□ -0.43
CACNB3-223ENST00000552480 PRDX6P30041 224 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 GDF5P43026 501 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 RASSF2P50749 326 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 DMPKQ09013 629 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 UBXN2BQ14CS0 331 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 LETMD1Q6P1Q0 360 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 CHSY3Q70JA7 882 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 ASRGL1Q7L266 308 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 MILR1Q7Z6M3 343 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 PDZD3Q86UT5 571 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 OR4F6Q8NGB9 312 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 NELL2Q99435 816 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 CCT7Q99832 543 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 TIMM29Q9BSF4 260 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 NTMT1Q9BV86 223 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 LRMDAQ9H2I8 198 aa12.38□□□□□ -0.43
CACNB3-223ENST00000552480 PFDN4Q9NQP4 134 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms