RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 TCN2P20062 427 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 CDH3P22223 829 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 PRKAA1Q13131 559 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 ERV3-1Q14264 604 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 PCID2Q5JVF3 399 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 LCN10Q6JVE6 187 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 CES3Q6UWW8 571 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 GSTA5Q7RTV2 222 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 TRIM73Q86UV7 250 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 AMIGO1Q86WK6 493 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 VRK3Q8IV63 474 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 LMNTD1Q8N9Z9 388 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 CT55Q8WUE5 264 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 EFHD1Q9BUP0 239 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 PITPNM3Q9BZ71 974 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 KCND1Q9NSA2 647 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 TREX1Q9NSU2 369 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 SOHLH2Q9NX45 425 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 SPHK1Q9NYA1 384 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 TTC7AQ9ULT0 858 aaPredicted RBP10.38□□□□□ -0.75
CHEK1-218ENST00000544373 PLAGL1Q9UM63 463 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 ASF1AQ9Y294 204 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 BTRCQ9Y297 605 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 UBR5O95071 2799 aaPredicted RBP10.38□□□□□ -0.75
CHEK1-218ENST00000544373 HCRTR1O43613 425 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 SLC28A2O43868 658 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 SCRG1O75711 98 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 FTH1P02794 183 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 GSTM1P09488 218 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 OR56A5P0C7T3 313 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 CCNYL3P0C7X3 344 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 NMBRP28336 390 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 CCR10P46092 362 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 RPS18P62269 152 aaKnown RBP10.38□□□□□ -0.75
CHEK1-218ENST00000544373 PRAMEP78395 509 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 GSTM4Q03013 218 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 ABRQ12979 859 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 GPS2Q13227 327 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 KCNAB2Q13303 367 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 DNASE1L3Q13609 305 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 LAMB3Q13751 1172 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 FASTKD1Q53R41 847 aaKnown RBP10.38□□□□□ -0.75
CHEK1-218ENST00000544373 ZNF789Q5FWF6 425 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 TTC27Q6P3X3 843 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 UNC5AQ6ZN44 842 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 NLRP9Q7RTR0 991 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 PRICKLE2Q7Z3G6 844 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 KRT222Q8N1A0 295 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 PPHLN1Q8NEY8 458 aaKnown RBP10.38□□□□□ -0.75
CHEK1-218ENST00000544373 OR1L3Q8NH93 324 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 MS4A14Q96JA4 679 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 CATSPER2Q96P56 530 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 TRAPPC9Q96Q05 1148 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 SLC25A18Q9H1K4 315 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 EIF2B3Q9NR50 452 aaKnown RBP10.38□□□□□ -0.75
CHEK1-218ENST00000544373 C1GALT1Q9NS00 363 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 CIDEBQ9UHD4 219 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 CDYLQ9Y232 598 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 ZKSCAN5Q9Y2L8 839 aa10.38□□□□□ -0.75
CHEK1-218ENST00000544373 TDRKHQ9Y2W6 561 aaKnown RBP10.38□□□□□ -0.75
CHEK1-218ENST00000544373 PIPSLA2A3N6 862 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 GOLGA8KD6RF30 607 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 GOLGA8TH3BQL2 631 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 J3QKU1 62 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 CD3EAPO15446 510 aaKnown RBP10.37□□□□□ -0.75
CHEK1-218ENST00000544373 AVILO75366 819 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 CTSBP07858 339 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 SPTBP11277 2137 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 MGAT1P26572 445 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 ARNTP27540 789 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 VPS41P49754 854 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 HSPA14Q0VDF9 509 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 ZIC1Q15915 447 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 SYTL3Q4VX76 610 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 TMTC4Q5T4D3 741 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 FAM69BQ5VUD6 431 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 LYPLAL1Q5VWZ2 237 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 ANKRD22Q5VYY1 191 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 ZNF449Q6P9G9 518 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 CDHR3Q6ZTQ4 885 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 BPHLQ86WA6 291 aaPredicted RBP10.37□□□□□ -0.75
CHEK1-218ENST00000544373 PTRH1Q86Y79 214 aaKnown RBP10.37□□□□□ -0.75
CHEK1-218ENST00000544373 TMEM126BQ8IUX1 230 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 CARFQ8N187 725 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 OR5K2Q8NHB8 316 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 FLVCR1-AS1Q8TAF5 88 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.37□□□□□ -0.75
CHEK1-218ENST00000544373 MFSD3Q96ES6 412 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 SGSM3Q96HU1 749 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 FCRL4Q96PJ5 515 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 TRIM56Q9BRZ2 755 aaKnown RBP10.37□□□□□ -0.75
CHEK1-218ENST00000544373 AP1M1Q9BXS5 423 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 ACTL8Q9H568 366 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 FAM60AQ9NP50 221 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 ZNF71Q9NQZ8 489 aaPredicted RBP10.37□□□□□ -0.75
CHEK1-218ENST00000544373 CATSPERZQ9NTU4 200 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 SYBUQ9NX95 663 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 ACTR10Q9NZ32 417 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 KCNMB2Q9Y691 235 aa10.37□□□□□ -0.75
CHEK1-218ENST00000544373 CDC14CA4D256 554 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms