RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	USP50	Q70EL3	339 aa	Predicted RBP	12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	DET1	Q7L5Y6	550 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	GALNT5	Q7Z7M9	940 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	LIX1	Q8N485	282 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	TTC9B	Q8N6N2	239 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	MINDY2	Q8NBR6	621 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	SH3GL1	Q99961	368 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	ADAM2	Q99965	735 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	TRIT1	Q9H3H1	467 aa	Known RBP	12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	PCDH12	Q9NPG4	1184 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	SCUBE2	Q9NQ36	999 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	UBA2	Q9UBT2	640 aa	Predicted RBP	12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	HTR3E	A5X5Y0	456 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	RGS14	O43566	566 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	TSPAN3	O60637	253 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	MITF	O75030	526 aa	Predicted RBP	12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	PGR	P06401	933 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	ALOX5	P09917	674 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	HSPA7	P48741	367 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	KPNA1	P52294	538 aa	Predicted RBP	12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	VBP1	P61758	197 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	TRAF3	Q13114	568 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	DNASE1L3	Q13609	305 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	ACOX1	Q15067	660 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	PTPRR	Q15256	657 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	RFX4	Q33E94	735 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	MORN1	Q5T089	497 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	CCDC81	Q6ZN84	652 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	LRRC8D	Q7L1W4	858 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	GPR149	Q86SP6	731 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	HIPK1	Q86Z02	1210 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	KRTCAP2	Q8N6L1	136 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	OR10Q1	Q8NGQ4	319 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	SGIP1	Q9BQI5	828 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	OLA1	Q9NTK5	396 aa	Known RBP	12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	RGS17	Q9UGC6	210 aa	Predicted RBP	12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	INTS6	Q9UL03	887 aa	Known RBP	12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	CCL27	Q9Y4X3	112 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	PCDHGC4	Q9Y5F7	938 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838		F5H5T6	163 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	PRMT5	O14744	637 aa	Predicted RBP	12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	GPR39	O43194	453 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	HOXD12	P35452	270 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	SERPINB10	P48595	397 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	HMGCS1	Q01581	520 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	IL18R1	Q13478	541 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	IRF5	Q13568	498 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	NPTX1	Q15818	432 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	TMEM236	Q5W0B7	351 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	ATAD1	Q8NBU5	361 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	OR52E4	Q8NGH9	312 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	NETO1	Q8TDF5	533 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	ZNF566	Q969W8	418 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	PSKH2	Q96QS6	385 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	BCL7B	Q9BQE9	202 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	NECTIN3	Q9NQS3	549 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	AASS	Q9UDR5	926 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	FBXO10	Q9UK96	956 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	PCDHGB1	Q9Y5G3	927 aa		12.68	□□□□□ -0.38
DDX11-223	ENST00000542838	FFAR2	O15552	330 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	RET	P07949	1114 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	BMP4	P12644	408 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	CLCN7	P51798	805 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	MGAT3	Q09327	533 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	TAF10	Q12962	218 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	MAD2L1	Q13257	205 aa	Predicted RBP	12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	NFE2	Q16621	373 aa	Predicted RBP	12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	CXCL17	Q6UXB2	119 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	ADAMTSL2	Q86TH1	951 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	HPS1	Q92902	700 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	FAM120B	Q96EK7	910 aa	Known RBP	12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	FUBP3	Q96I24	572 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	OR52E6	Q96RD3	313 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	PSD2	Q9BQI7	771 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	HERC2P3	Q9BVR0	1158 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	RIBC2	Q9H4K1	309 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	MAGIX	Q9H6Y5	334 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	TLR8	Q9NR97	1041 aa	Known RBP	12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	FARSB	Q9NSD9	589 aa	Known RBP	12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	SACM1L	Q9NTJ5	587 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838		Q9Y3F1	56 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	FAM32A	Q9Y421	112 aa	Known RBP	12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	ANGPTL3	Q9Y5C1	460 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	DNAH12	Q6ZR08	3092 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	ARVCF	O00192	962 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	IGLV3-27	P01718	113 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	ESR1	P03372	595 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	IL6	P05231	212 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	ITGAM	P11215	1152 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	CYP4B1	P13584	511 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	TGM1	P22735	817 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	IGFBP5	P24593	272 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	PSMB9	P28065	219 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	THPO	P40225	353 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	PTGER3	P43115	390 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	DGCR6	Q14129	220 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	SIM2	Q14190	667 aa	Predicted RBP	12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	PGS1	Q32NB8	556 aa		12.67	□□□□□ -0.38
DDX11-223	ENST00000542838	SGO1	Q5FBB7	561 aa		12.67	□□□□□ -0.38

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