RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 KRTAP10-9P60411 292 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 TEFQ10587 303 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 PLA2G7Q13093 441 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 PPIGQ13427 754 aaKnown RBP eCLIP4.12□□□□□ -1.75
SNHG1-217ENST00000541578 CTF1Q16619 201 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 MYLK3Q32MK0 819 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 GLRA4Q5JXX5 417 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 Q5PR19 223 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 PARM1Q6UWI2 310 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 SLC16A12Q6ZSM3 486 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 TPRG1Q6ZUI0 275 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 GPR180Q86V85 440 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 GPSM1Q86YR5 675 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 C4orf19Q8IY42 314 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 TRIML1Q8N9V2 468 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 ATAD1Q8NBU5 361 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 C7orf57Q8NEG2 295 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 TMEM163Q8TC26 289 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 OIT3Q8WWZ8 545 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 ATP6V0A1Q93050 837 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 MR1Q95460 341 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 ARSGQ96EG1 525 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 UTP14AQ9BVJ6 771 aaKnown RBP4.12□□□□□ -1.75
SNHG1-217ENST00000541578 GTPBP2Q9BX10 602 aaKnown RBP4.12□□□□□ -1.75
SNHG1-217ENST00000541578 MOV10L1Q9BXT6 1211 aaKnown RBP4.12□□□□□ -1.75
SNHG1-217ENST00000541578 GPR88Q9GZN0 384 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 EQTNQ9NQ60 294 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 HIF1ANQ9NWT6 349 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 IFT172Q9UG01 1749 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 TECPR2O15040 1411 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 ANKARQ7Z5J8 1434 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 NRKQ7Z2Y5 1582 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 A4D1N5 150 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 TMEM8BA6NDV4 472 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 ENO4A6NNW6 628 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 MS4A18H0YCH9 400 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 CCDC188H7C350 402 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 IFIT3O14879 490 aaKnown RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 SPRY1O43609 319 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 PLPP2O43688 288 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 HTATSF1O43719 755 aaKnown RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 MT-ND3P03897 115 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 GBAP04062 536 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 CYP1A2P05177 515 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 NGFRP08138 427 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 OR52Z1P0C646 297 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 TGFB3P10600 412 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 GABRA5P31644 462 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 RASSF2P50749 326 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 ACSM1Q08AH1 577 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 TUBB2AQ13885 445 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 GPR18Q14330 331 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 NR1D2Q14995 579 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 RRS1Q15050 365 aaKnown RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 TAZQ16635 292 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 TWISTNBQ3B726 338 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 TTC31Q49AM3 519 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 ANKRD20A4Q4UJ75 823 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 ANKRD20A8PQ5CZ79 823 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 PPP6R3Q5H9R7 873 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 ANKRD20A2Q5SQ80 823 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 ANKRD20A1Q5TYW2 823 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 ANKRD20A3Q5VUR7 823 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 DCAF12L2Q5VW00 463 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 SHEQ5VZ18 495 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 TYW3Q6IPR3 259 aaKnown RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 TEX38Q6PEX7 206 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 B3GNT6Q6ZMB0 384 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 TIGD4Q8IY51 512 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 FBXL14Q8N1E6 418 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 OR8H1Q8NGG4 311 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 TBC1D16Q8TBP0 767 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 WDR20Q8TBZ3 569 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 GPT2Q8TD30 523 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 UTP15Q8TED0 518 aaKnown RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 WASF1Q92558 559 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 KRT35Q92764 455 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 EXT2Q93063 718 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 SLAMF9Q96A28 289 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 SPSB1Q96BD6 273 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 STAMBPL1Q96FJ0 436 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 PPP1R13BQ96KQ4 1090 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 SFXN2Q96NB2 322 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 INTS14Q96SY0 518 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 SLX1AQ9BQ83 275 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 WDR77Q9BQA1 342 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 MSTO1Q9BUK6 570 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 MLPHQ9BV36 600 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 TUBB2BQ9BVA1 445 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 FNDC11Q9BVV2 318 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 ESRP2Q9H6T0 727 aaKnown RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 IL1RAPL2Q9NP60 686 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 CHCHD3Q9NX63 227 aaKnown RBP4.11□□□□□ -1.75
SNHG1-217ENST00000541578 ERAP1Q9NZ08 941 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 PCDHA7Q9UN72 937 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 KCNK7Q9Y2U2 307 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 LRP12Q9Y561 859 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 KNDC1Q76NI1 1749 aa4.11□□□□□ -1.75
SNHG1-217ENST00000541578 ABCA3Q99758 1704 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms