RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 LILRA2Q8N149 483 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 GALNT16Q8N428 558 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 ENDOVQ8N8Q3 282 aaKnown RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 MSANTD4Q8NCY6 345 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 EXD1Q8NHP7 514 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 GRHL3Q8TE85 626 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 FNIP1Q8TF40 1166 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 CENPIQ92674 756 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF669Q96BR6 464 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 AP2M1Q96CW1 435 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 C14orf79Q96F83 325 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 SCRN2Q96FV2 425 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF514Q96K75 400 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 FER1L6-AS2Q96M78 137 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 IP6K3Q96PC2 410 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 PLEKHG4BQ96PX9 1271 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 GSDMAQ96QA5 445 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 MCCC1Q96RQ3 725 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 SLX1AQ9BQ83 275 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 CINPQ9BW66 212 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 MAGEB5Q9BZ81 275 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 ABCG8Q9H221 673 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF552Q9H707 407 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 LRRC19Q9H756 370 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 CATSPERBQ9H7T0 1116 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 FGF21Q9NSA1 209 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 KCND1Q9NSA2 647 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 FBXL7Q9UJT9 491 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 KCNK6Q9Y257 313 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.5□□□□□ -1.692e-26■□□□□ 8.9
SNHG1-214ENST00000540865 SLC30A1Q9Y6M5 507 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 CROCCQ5TZA2 2017 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 PCSK5Q92824 1860 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 ANK2Q01484 3957 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 COL6A5A8TX70 2615 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 IGHV5-51A0A0C4DH38 117 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 A0A0U1RQS6 177 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 NPIPB15A6NHN6 443 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 ARHGAP42A6NI28 874 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 C2CD4BA6NLJ0 364 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 GOLGA8SH3BPF8 625 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 LSM8O95777 96 aaKnown RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 CAPN1P07384 714 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 ACP5P13686 325 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 AGAP20933 346 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 HTR7P34969 479 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 CA5AP35218 305 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 HADHAP40939 763 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 PPP1R2P41236 205 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 PTPN9P43378 593 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 PAPOLAP51003 745 aaKnown RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 SCNN1BP51168 640 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 TUBB4BP68371 445 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 OTUD4Q01804 1114 aaKnown RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 STIM1Q13586 685 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 ATP1A4Q13733 1029 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 TUBB2AQ13885 445 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 KCNAB1Q14722 419 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 ASIC2Q16515 512 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 CDO1Q16878 200 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 C15orf59Q2T9L4 293 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 RAB6CQ53S08 254 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 DCAF10Q5QP82 559 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 PLEKHS1Q5SXH7 462 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 B3GNTL1Q67FW5 361 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 IRGCQ6NXR0 463 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 RPUSD3Q6P087 351 aaKnown RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 TRIM65Q6PJ69 517 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 XKRXQ6PP77 449 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 USP45Q70EL2 814 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 SLFN11Q7Z7L1 901 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 MRGPREQ86SM8 312 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 TMEM126BQ8IUX1 230 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 RAVER1Q8IY67 606 aaKnown RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 DSELQ8IZU8 1212 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 D2HGDHQ8N465 521 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 AOPEPQ8N6M6 819 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 CCDC185Q8N715 623 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 EMC1Q8N766 993 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 SLC38A9Q8NBW4 561 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 CLEC1AQ8NC01 280 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 PPP4R1Q8TF05 950 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 RXFP2Q8WXD0 754 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 CPT1BQ92523 772 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 RSC1A1Q92681 617 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 SCAMP4Q969E2 229 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 DHTKD1Q96HY7 919 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 CCDC140Q96MF4 163 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 NSMCE3Q96MG7 304 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 TRAPPC9Q96Q05 1148 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 PSKH2Q96QS6 385 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 DIRC2Q96SL1 478 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 CD180Q99467 661 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 WDR77Q9BQA1 342 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 DHRS4Q9BTZ2 278 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 MLPHQ9BV36 600 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 TUBB2BQ9BVA1 445 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 RAB6CQ9H0N0 254 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 PDCL3Q9H2J4 239 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 MCCC2Q9HCC0 563 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms