RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 HIST1H2AJQ99878 128 aa23.97■■□□□ 1.43
TTC3-225ENST00000540756 H2AFJQ9BTM1 129 aa23.97■■□□□ 1.43
TTC3-225ENST00000540756 OPTCQ9UBM4 332 aa23.97■■□□□ 1.43
TTC3-225ENST00000540756 ENO2P09104 434 aaPredicted RBP23.96■■□□□ 1.43
TTC3-225ENST00000540756 LINC00032P0C843 101 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 CYP2A7P20853 494 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 TRAF3Q13114 568 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 SP140Q13342 867 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 POU5F2Q8N7G0 328 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 OR4F6Q8NGB9 312 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 OR2L2Q8NH16 312 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 FBXO27Q8NI29 283 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 MCOLN3Q8TDD5 553 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 KLHL29Q96CT2 875 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 ZNF514Q96K75 400 aaPredicted RBP23.96■■□□□ 1.43
TTC3-225ENST00000540756 CCDC28BQ9BUN5 200 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 TRIM54Q9BYV2 358 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 ATG10Q9H0Y0 220 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 LMAN1LQ9HAT1 526 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 MAN2B1O00754 1011 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 SLC16A5O15375 505 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 CRCPO75575 148 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 STK16O75716 305 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 DNAJC8O75937 253 aaPredicted RBP23.96■■□□□ 1.43
TTC3-225ENST00000540756 CLDN2P57739 230 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 DDIASQ8IXT1 998 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 ARHGEF3Q9NR81 526 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 ZNHIT2Q9UHR6 403 aa23.96■■□□□ 1.43
TTC3-225ENST00000540756 POM121BA6NF01 834 aa23.95■■□□□ 1.42
TTC3-225ENST00000540756 MGAT4DA6NG13 374 aa23.95■■□□□ 1.42
TTC3-225ENST00000540756 K7EPI3 171 aa23.95■■□□□ 1.42
TTC3-225ENST00000540756 MYO1CO00159 1063 aa23.95■■□□□ 1.42
TTC3-225ENST00000540756 LIN7AO14910 233 aaPredicted RBP23.95■■□□□ 1.42
TTC3-225ENST00000540756 EPORP19235 508 aa23.95■■□□□ 1.42
TTC3-225ENST00000540756 CDKL1Q00532 357 aa23.95■■□□□ 1.42
TTC3-225ENST00000540756 MAP7D1Q3KQU3 841 aa23.95■■□□□ 1.42
TTC3-225ENST00000540756 METTL21CQ5VZV1 264 aa23.95■■□□□ 1.42
TTC3-225ENST00000540756 PGBD3Q8N328 593 aa23.95■■□□□ 1.42
TTC3-225ENST00000540756 ATP6V1E2Q96A05 226 aa23.95■■□□□ 1.42
TTC3-225ENST00000540756 MRPL40Q9NQ50 206 aaKnown RBP23.95■■□□□ 1.42
TTC3-225ENST00000540756 MUC3AQ02505 3323 aa23.95■■□□□ 1.42
TTC3-225ENST00000540756 H0Y8X5 98 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 AOC1P19801 751 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 FZD5Q13467 585 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 PTCHD3Q3KNS1 767 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 PRPF38BQ5VTL8 546 aaKnown RBP23.94■■□□□ 1.42
TTC3-225ENST00000540756 RINLQ6ZS11 566 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 LMNTD1Q8N9Z9 388 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 CEP70Q8NHQ1 597 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 FOXQ1Q9C009 403 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 ZNF385DQ9H6B1 395 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 ST14Q9Y5Y6 855 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 C17orf113A0A1B0GUU1 675 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 SCAMP1O15126 338 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 LATO43561 262 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 ESRRAP11474 423 aaPredicted RBP23.94■■□□□ 1.42
TTC3-225ENST00000540756 GGT5P36269 586 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 ANO7Q6IWH7 933 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 LARP4Q71RC2 724 aaKnown RBP eCLIP23.94■■□□□ 1.422e-7■■■□□ 16.7
TTC3-225ENST00000540756 LRRTM4Q86VH4 590 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 HBEGFQ99075 208 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 AKTIPQ9H8T0 292 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 SORCS3Q9UPU3 1222 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 ANGPTL3Q9Y5C1 460 aa23.94■■□□□ 1.42
TTC3-225ENST00000540756 CAPN1P07384 714 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 MYCLP1P12525 358 aaPredicted RBP23.93■■□□□ 1.42
TTC3-225ENST00000540756 ITPKAP23677 461 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 SLC6A12P48065 614 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 PIK3CGP48736 1102 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 CCNG1P51959 295 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 NAA20P61599 178 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 UBXN2BQ14CS0 331 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 NEK5Q6P3R8 708 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 AMZ2Q86W34 360 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 FRMD1Q8N878 549 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 HM13Q8TCT9 377 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 ACTRT2Q8TDY3 377 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 STON2Q8WXE9 905 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 PKP4Q99569 1192 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 BTBD1Q9H0C5 482 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 PHPT1Q9NRX4 125 aaPredicted RBP23.93■■□□□ 1.42
TTC3-225ENST00000540756 PSMD13Q9UNM6 376 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 COPG1Q9Y678 874 aaKnown RBP23.93■■□□□ 1.42
TTC3-225ENST00000540756 LOC100653049A0A140TA62 436 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 GIPC1O14908 333 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 ATP5HO75947 161 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 KRT34O76011 436 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 CEACAM5P06731 702 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 UROSP10746 265 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 CALB2P22676 271 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 MAP4P27816 1152 aaKnown RBP23.93■■□□□ 1.42
TTC3-225ENST00000540756 TEAD1P28347 426 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 HTR6P50406 440 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 KLF10Q13118 480 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 GRB7Q14451 532 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 CDKL4Q5MAI5 379 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 MILR1Q7Z6M3 343 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 SNX31Q8N9S9 440 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 PPFIBP2Q8ND30 876 aa23.93■■□□□ 1.42
TTC3-225ENST00000540756 MIPEPQ99797 713 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms