RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 SLC47A1Q96FL8 570 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 ITCHQ96J02 903 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 MBOAT4Q96T53 435 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 FAM126AQ9BYI3 521 aaPredicted RBP11.72□□□□□ -0.53
CPNE8-203ENST00000538596 PAIP1Q9H074 479 aaKnown RBP11.72□□□□□ -0.53
CPNE8-203ENST00000538596 TNKS2Q9H2K2 1166 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 PLGRKTQ9HBL7 147 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 STARD7Q9NQZ5 370 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 LATS2Q9NRM7 1088 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 OPTCQ9UBM4 332 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 PRRC2BQ5JSZ5 2229 aaKnown RBP11.72□□□□□ -0.53
CPNE8-203ENST00000538596 ULK1O75385 1050 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 GMNNO75496 209 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 GLUD1P00367 558 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 AGXTP21549 392 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 NEK2P51955 445 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 ARHGEF7Q14155 803 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 CHRNA6Q15825 494 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 TAF12Q16514 161 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 CTU2Q2VPK5 515 aaKnown RBP11.72□□□□□ -0.53
CPNE8-203ENST00000538596 ZNF773Q6PK81 442 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 OR13F1Q8NGS4 319 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 FRS2Q8WU20 508 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 NCLNQ969V3 563 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 FAM162AQ96A26 154 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 PPP3R2Q96LZ3 170 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 CD244Q9BZW8 370 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 LHPPQ9H008 270 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 ACTR8Q9H981 624 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 MAGEE1Q9HCI5 957 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 HPS4Q9NQG7 708 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 AFF4Q9UHB7 1163 aaKnown RBP11.72□□□□□ -0.53
CPNE8-203ENST00000538596 CLEC4EQ9ULY5 219 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 EIF3LQ9Y262 564 aaKnown RBP11.72□□□□□ -0.53
CPNE8-203ENST00000538596 OARD1Q9Y530 152 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 PCDHB1Q9Y5F3 818 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 DYTNA2CJ06 578 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 CXCR6O00574 342 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 GNGT2O14610 69 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 RGS14O43566 566 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 MBL2P11226 248 aaPredicted RBP11.71□□□□□ -0.53
CPNE8-203ENST00000538596 BPIP17213 487 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 AKT1P31749 480 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 HNF1BP35680 557 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 SMARCB1Q12824 385 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 SLC8B1Q6J4K2 584 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 NECAB2Q7Z6G3 386 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 ZSWIM9Q86XI8 627 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 ZNF420Q8TAQ5 688 aaPredicted RBP11.71□□□□□ -0.53
CPNE8-203ENST00000538596 MIPOL1Q8TD10 442 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 C2orf15Q8WU43 125 aaKnown RBP11.71□□□□□ -0.53
CPNE8-203ENST00000538596 OR52E6Q96RD3 313 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 ZBTB18Q99592 522 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 CLSTN3Q9BQT9 956 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 FAM118AQ9NWS6 357 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 CIDEBQ9UHD4 219 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 GNPTGQ9UJJ9 305 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 INVSQ9Y283 1065 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 DLGAP4Q9Y2H0 992 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 PCDHB14Q9Y5E9 798 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 OR51B4Q9Y5P0 310 aa11.71□□□□□ -0.53
CPNE8-203ENST00000538596 ELOVL7A1L3X0 281 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 GRXCR2A6NFK2 248 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 CPNE6O95741 557 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 HTR1AP08908 422 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 SELPP16109 830 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 CRHBPP24387 322 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 GNPDA1P46926 289 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 TUFMP49411 452 aaKnown RBP11.71□□□□□ -0.54
CPNE8-203ENST00000538596 CDH18Q13634 790 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 LAPTM4AQ15012 233 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 ANKRD26P1Q6NSI1 321 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 RFLNAQ6ZTI6 216 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 THAP5Q7Z6K1 395 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 RBFAQ8N0V3 343 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 ZBTB2Q8N680 514 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 NETO1Q8TDF5 533 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 ACDQ96AP0 544 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 CSF3RQ99062 836 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 INPP5KQ9BT40 448 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 GORASP2Q9H8Y8 452 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 LRTM1Q9HBL6 345 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 DNAAF2Q9NVR5 837 aaKnown RBP11.71□□□□□ -0.54
CPNE8-203ENST00000538596 AASSQ9UDR5 926 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 MBD1Q9UIS9 605 aaPredicted RBP11.71□□□□□ -0.54
CPNE8-203ENST00000538596 CRLS1Q9UJA2 301 aa11.71□□□□□ -0.54
CPNE8-203ENST00000538596 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.7□□□□□ -0.54
CPNE8-203ENST00000538596 SH3PXD2BA1X283 911 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 MANBAO00462 879 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 AXIN1O15169 862 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 BNIP3LO60238 219 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 LRATO95237 230 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 MYCLP1P12525 358 aaPredicted RBP11.7□□□□□ -0.54
CPNE8-203ENST00000538596 ACRV1P26436 265 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 RGS4P49798 205 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 NFATC3Q12968 1075 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 KCNAB2Q13303 367 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 PON2Q15165 354 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 ZXDCQ2QGD7 858 aaPredicted RBP11.7□□□□□ -0.54
CPNE8-203ENST00000538596 GPRC6AQ5T6X5 926 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms