RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CLCA3PQ9Y6N3 262 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 B4DGG1 531 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 GPIP06744 558 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 MPIP34949 423 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 IL18Q14116 193 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 SGCBQ16585 318 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 ABHD13Q7L211 337 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 BRI3BPQ8WY22 251 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 ROPN1LQ96C74 230 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 GPATCH1Q9BRR8 931 aaKnown RBP16.53■□□□□ 0.24
SCARB1-205ENST00000538291 NKIRAS2Q9NYR9 191 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 CDH22Q9UJ99 828 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 GMEB2Q9UKD1 530 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 Q9Y3F1 56 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 DUXAA6NLW8 204 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 ZNF879B4DU55 563 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 AP2A2O94973 939 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 PLGP00747 810 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-205ENST00000538291 TNFP01375 233 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 IL18R1Q13478 541 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 SOWAHAQ2M3V2 549 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 FAR1Q8WVX9 515 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 KCTD13Q8WZ19 329 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 FCRL5Q96RD9 977 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 WDR12Q9GZL7 423 aaKnown RBP16.53■□□□□ 0.24
SCARB1-205ENST00000538291 ADAP2Q9NPF8 381 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 DTLQ9NZJ0 730 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 COMMD3-BMI1R4GMX3 469 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 K7EPI3 171 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 GSC2O15499 205 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 CRISP3P54108 245 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 NUDT13Q86X67 352 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 OR2L5Q8NG80 312 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 SUSD3Q96L08 255 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 MAN2B2Q9Y2E5 1009 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 PCDHB11Q9Y5F2 797 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 ILVBLA1L0T0 632 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 ALPPP05187 535 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 SLC7A1P30825 629 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 ATG14Q6ZNE5 492 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 FSTL5Q8N475 847 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-205ENST00000538291 CAPSLQ8WWF8 208 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 CLPTM1LQ96KA5 538 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 NTPCRQ9BSD7 190 aaKnown RBP16.53■□□□□ 0.24
SCARB1-205ENST00000538291 GATA5Q9BWX5 397 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-205ENST00000538291 SERINC1Q9NRX5 453 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 C9IYK1 514 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 CD2P06729 351 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 PRDX6P30041 224 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 ALDH3A2P51648 485 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 GJA9P57773 515 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 TAS2R39P59534 338 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 FASTKD3Q14CZ7 662 aaKnown RBP16.53■□□□□ 0.24
SCARB1-205ENST00000538291 EOGTQ5NDL2 527 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 CLEC20AQ6ZU45 233 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 SLCO6A1Q86UG4 719 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 DCAKDQ8WVC6 231 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 DUSP26Q9BV47 211 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 SMPD3Q9NY59 655 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-205ENST00000538291 ZDHHC3Q9NYG2 299 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 ARL5AQ9Y689 179 aa16.53■□□□□ 0.24
SCARB1-205ENST00000538291 ZNF208O43345 1280 aa16.52■□□□□ 0.24
SCARB1-205ENST00000538291 PAPSS2O95340 614 aaPredicted RBP16.52■□□□□ 0.24
SCARB1-205ENST00000538291 MLLT3P42568 568 aaPredicted RBP16.52■□□□□ 0.24
SCARB1-205ENST00000538291 RASGEF1BQ0VAM2 473 aa16.52■□□□□ 0.24
SCARB1-205ENST00000538291 RASGRP3Q8IV61 690 aa16.52■□□□□ 0.24
SCARB1-205ENST00000538291 TP53INP1Q96A56 240 aa16.52■□□□□ 0.24
SCARB1-205ENST00000538291 B3GALT6Q96L58 329 aa16.52■□□□□ 0.24
SCARB1-205ENST00000538291 EFCAB11Q9BUY7 163 aa16.52■□□□□ 0.24
SCARB1-205ENST00000538291 YAP1P46937 504 aaKnown RBP16.52■□□□□ 0.24
SCARB1-205ENST00000538291 NCBP2P52298 156 aaKnown RBP eCLIP16.52■□□□□ 0.241e-7■□□□□ 9.7
SCARB1-205ENST00000538291 RNASE12Q5GAN4 147 aaKnown RBP16.52■□□□□ 0.24
SCARB1-205ENST00000538291 VWA5B1Q5TIE3 1220 aa16.52■□□□□ 0.24
SCARB1-205ENST00000538291 BRAT1Q6PJG6 821 aa16.52■□□□□ 0.24
SCARB1-205ENST00000538291 PACS2Q86VP3 889 aa16.52■□□□□ 0.24
SCARB1-205ENST00000538291 OR10A6Q8NH74 314 aa16.52■□□□□ 0.24
SCARB1-205ENST00000538291 RIOK2Q9BVS4 552 aaKnown RBP16.52■□□□□ 0.24
SCARB1-205ENST00000538291 TBL1XR1Q9BZK7 514 aa16.52■□□□□ 0.24
SCARB1-205ENST00000538291 TFB2MQ9H5Q4 396 aaKnown RBP16.52■□□□□ 0.24
SCARB1-205ENST00000538291 MKKSQ9NPJ1 570 aaPredicted RBP16.52■□□□□ 0.24
SCARB1-205ENST00000538291 NOCTQ9UK39 431 aaKnown RBP16.52■□□□□ 0.24
SCARB1-205ENST00000538291 TESMINQ9Y4I5 508 aa16.52■□□□□ 0.24
SCARB1-205ENST00000538291 SERPINA3P01011 423 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 VBP1P61758 197 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 TLR1Q15399 786 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 DPYSL2Q16555 572 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 DNAJB8Q8NHS0 232 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 SLC13A3Q8WWT9 602 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 ZSCAN5AQ9BUG6 496 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 SSU72Q9NP77 194 aaKnown RBP16.52■□□□□ 0.23
SCARB1-205ENST00000538291 GKN1Q9NS71 199 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 AHCYL1O43865 530 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 REM1O75628 298 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 GATBO75879 557 aaKnown RBP16.52■□□□□ 0.23
SCARB1-205ENST00000538291 LCA5LO95447 670 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 PRAMEF12O95522 483 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 ANGPTL1O95841 491 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 RB1P06400 928 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 SLC1A2P43004 574 aa16.52■□□□□ 0.23
SCARB1-205ENST00000538291 SEMG2Q02383 582 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms