RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 RPS3P23396 243 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCDC61-201ENST00000536603 FMO4P31512 558 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 CCR7P32248 378 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 CD151P48509 253 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 CSE1LP55060 971 aaKnown RBP17.51■□□□□ 0.39
CCDC61-201ENST00000536603 EIF3BP55884 814 aaKnown RBP17.51■□□□□ 0.39
CCDC61-201ENST00000536603 NFKB2Q00653 900 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 PLCL1Q15111 1095 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 LONRF1Q17RB8 773 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 TYSND1Q2T9J0 566 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 HP1BP3Q5SSJ5 553 aaPredicted RBP17.51■□□□□ 0.39
CCDC61-201ENST00000536603 TEX35Q5T0J7 233 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 ATG14Q6ZNE5 492 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 CENPUQ71F23 418 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 VASH2Q86V25 355 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 CILP2Q8IUL8 1156 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 IGDCC3Q8IVU1 814 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 LKAAEAR1Q8TD35 194 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 TMEM159Q96B96 161 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 FERD3LQ96RJ6 166 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 TCF12Q99081 682 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 CMKLR1Q99788 373 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 RHOXF2Q9BQY4 288 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 TSSK1BQ9BXA7 367 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 GRHL1Q9NZI5 618 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 KLHL3Q9UH77 587 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 GNPTGQ9UJJ9 305 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 ACSL6Q9UKU0 697 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 CRYL1Q9Y2S2 319 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 HEBP2Q9Y5Z4 205 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 A8MU76 341 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 THRAP10827 490 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 ARL4CP56559 192 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 PLOD1Q02809 727 aaPredicted RBP17.5■□□□□ 0.39
CCDC61-201ENST00000536603 CTBP1Q13363 440 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 TRA2AQ13595 282 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC61-201ENST00000536603 C16orf72Q14CZ0 275 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 HIF1AQ16665 826 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 SYTL3Q4VX76 610 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 GLE1Q53GS7 698 aaKnown RBP17.5■□□□□ 0.39
CCDC61-201ENST00000536603 RNF187Q5TA31 235 aaPredicted RBP17.5■□□□□ 0.39
CCDC61-201ENST00000536603 ZNF470Q6ECI4 717 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 LRRC6Q86X45 466 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 ZFAND4Q86XD8 727 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 PLXDC1Q8IUK5 500 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 DENND6AQ8IWF6 608 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 UNC5BQ8IZJ1 945 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC61-201ENST00000536603 BBOF1Q8ND07 529 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 PHC3Q8NDX5 983 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 ZFPM2Q8WW38 1151 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 SEC14L1Q92503 715 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 LPGAT1Q92604 370 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 RSC1A1Q92681 617 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 TFGQ92734 400 aaPredicted RBP17.5■□□□□ 0.39
CCDC61-201ENST00000536603 USP7Q93009 1102 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 NAT9Q9BTE0 207 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 AKAP7Q9P0M2 348 aaPredicted RBP17.5■□□□□ 0.39
CCDC61-201ENST00000536603 PDP2Q9P2J9 529 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC61-201ENST00000536603 V9GYY5 206 aaPredicted RBP17.5■□□□□ 0.39
CCDC61-201ENST00000536603 PIEZO2Q9H5I5 2752 aa17.5■□□□□ 0.39
CCDC61-201ENST00000536603 NDC80O14777 642 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 TTC4O95801 387 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 S1PR4O95977 384 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 F7P08709 466 aaPredicted RBP17.49■□□□□ 0.39
CCDC61-201ENST00000536603 NDUFS1P28331 727 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 ELK3P41970 407 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 GFERP55789 205 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 GUCY2DQ02846 1103 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 HSPA14Q0VDF9 509 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 CRYMQ14894 314 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 HSP90AA5PQ58FG0 334 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 ZNF789Q5FWF6 425 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 SPANXN3Q5MJ09 141 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 CTSL3PQ5NE16 218 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 TMEM164Q5U3C3 297 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 ASZ1Q8WWH4 475 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 BIRC8Q96P09 236 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 PANX3Q96QZ0 392 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 KIR3DX1Q9H7L2 352 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 STARD5Q9NSY2 213 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 WHRNQ9P202 907 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 SLC24A2Q9UI40 661 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 VPS9D1Q9Y2B5 631 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 UTP11Q9Y3A2 253 aaKnown RBP17.49■□□□□ 0.39
CCDC61-201ENST00000536603 PCDHGA4Q9Y5G9 962 aa17.49■□□□□ 0.39
CCDC61-201ENST00000536603 HGSO14964 777 aaPredicted RBP17.48■□□□□ 0.39
CCDC61-201ENST00000536603 CAPN5O15484 640 aaPredicted RBP17.48■□□□□ 0.39
CCDC61-201ENST00000536603 APOA4P06727 396 aa17.48■□□□□ 0.39
CCDC61-201ENST00000536603 ERVK-10P10266 1014 aa17.48■□□□□ 0.39
CCDC61-201ENST00000536603 AOAHP28039 575 aa17.48■□□□□ 0.39
CCDC61-201ENST00000536603 ACADLP28330 430 aa17.48■□□□□ 0.39
CCDC61-201ENST00000536603 CSTF2P33240 577 aaKnown RBP eCLIP17.48■□□□□ 0.39
CCDC61-201ENST00000536603 ETV5P41161 510 aa17.48■□□□□ 0.39
CCDC61-201ENST00000536603 CAPZBP47756 277 aa17.48■□□□□ 0.39
CCDC61-201ENST00000536603 CALCOCO2Q13137 446 aa17.48■□□□□ 0.39
CCDC61-201ENST00000536603 NAA30Q147X3 362 aaPredicted RBP17.48■□□□□ 0.39
CCDC61-201ENST00000536603 ZDHHC24Q6UX98 284 aa17.48■□□□□ 0.39
CCDC61-201ENST00000536603 KCNMB4Q86W47 210 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms