RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 GOT2P00505 430 aaKnown RBP12.1□□□□□ -0.47
PRKDC-207ENST00000536483 TUBB4AP04350 444 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 NTRK1P04629 796 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 SLC35G4P0C7Q5 338 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 CCNYL3P0C7X3 344 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 FGF5P12034 268 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 MLNP12872 115 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 NELFEP18615 380 aaKnown RBP12.1□□□□□ -0.47
PRKDC-207ENST00000536483 ACADLP28330 430 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 PPARGP37231 505 aaPredicted RBP12.1□□□□□ -0.47
PRKDC-207ENST00000536483 IRGCQ6NXR0 463 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 TTC27Q6P3X3 843 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 ASB18Q6ZVZ8 466 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 GSTA5Q7RTV2 222 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 BPHLQ86WA6 291 aaPredicted RBP12.1□□□□□ -0.47
PRKDC-207ENST00000536483 PPP1R3BQ86XI6 285 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 LILRA3Q8N6C8 439 aaPredicted RBP12.1□□□□□ -0.47
PRKDC-207ENST00000536483 MCUQ8NE86 351 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 SPDYE1Q8NFV5 336 aaPredicted RBP12.1□□□□□ -0.47
PRKDC-207ENST00000536483 UBXN4Q92575 508 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.1□□□□□ -0.47
PRKDC-207ENST00000536483 C12orf66Q96MD2 445 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 FCRL4Q96PJ5 515 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 OSBPL9Q96SU4 736 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 MVB12BQ9H7P6 319 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 CHRAC1Q9NRG0 131 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 SMARCAL1Q9NZC9 954 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 BFARQ9NZS9 450 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 TLK1Q9UKI8 766 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 PADI1Q9ULC6 663 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 SNX12Q9UMY4 172 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 PRSS21Q9Y6M0 314 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 USP9XQ93008 2570 aaPredicted RBP12.1□□□□□ -0.47
PRKDC-207ENST00000536483 BLACEA4D250 179 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 OR51F1A6NGY5 319 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 PGRMC1O00264 195 aaKnown RBP12.09□□□□□ -0.47
PRKDC-207ENST00000536483 RFPL1O75677 317 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 TIAF1O95411 115 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 FTH1P02794 183 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 PDGFAP04085 211 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 ARNTP27540 789 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 COILP38432 576 aaPredicted RBP12.09□□□□□ -0.47
PRKDC-207ENST00000536483 CD97P48960 835 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 FNTAP49354 379 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 PPP1CAP62136 330 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 DNASE1L3Q13609 305 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 BOP1Q14137 746 aaKnown RBP12.09□□□□□ -0.47
PRKDC-207ENST00000536483 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.09□□□□□ -0.47
PRKDC-207ENST00000536483 AARS2Q5JTZ9 985 aaKnown RBP12.09□□□□□ -0.47
PRKDC-207ENST00000536483 ZNF449Q6P9G9 518 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 ATCAYQ86WG3 371 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 SLC35F6Q8N357 371 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 ACVR1CQ8NER5 493 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 PPHLN1Q8NEY8 458 aaKnown RBP12.09□□□□□ -0.47
PRKDC-207ENST00000536483 COG1Q8WTW3 980 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 CT55Q8WUE5 264 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 NAT14Q8WUY8 206 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 SLCO2A1Q92959 643 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 MAGOHBQ96A72 148 aaKnown RBP12.09□□□□□ -0.47
PRKDC-207ENST00000536483 MS4A14Q96JA4 679 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 PSMG3-AS1Q96PY0 264 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 CARD6Q9BX69 1037 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 LHX9Q9NQ69 397 aa12.09□□□□□ -0.47
PRKDC-207ENST00000536483 IMP3Q9NV31 184 aaKnown RBP12.09□□□□□ -0.47
PRKDC-207ENST00000536483 SPTAN1Q13813 2472 aaKnown RBP12.09□□□□□ -0.47
PRKDC-207ENST00000536483 RP1L1Q8IWN7 2480 aaPredicted RBP12.08□□□□□ -0.48
PRKDC-207ENST00000536483 IGHV5-51A0A0C4DH38 117 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 TCRBV7S3A2A0A539 114 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 MAGEB16A2A368 324 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 TLCD2A6NGC4 264 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 BHMG1C9JSJ3 638 aaPredicted RBP12.08□□□□□ -0.48
PRKDC-207ENST00000536483 MATN2O00339 956 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 KIF5CO60282 957 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 GPC4O75487 556 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 DNAJB5O75953 348 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 KRT14P02533 472 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 MT-ND3P03897 115 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 POLBP06746 335 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 OR56A5P0C7T3 313 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 MSL3P1P0C860 447 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 FOLR1P15328 257 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 RPS3P23396 243 aaKnown RBP eCLIP12.08□□□□□ -0.483e-7■■■□□ 17.4
PRKDC-207ENST00000536483 PDHA2P29803 388 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 PBLDP30039 288 aaPredicted RBP12.08□□□□□ -0.48
PRKDC-207ENST00000536483 MAGEA3P43357 314 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 TTPAP49638 278 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 PMS2P54278 862 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 ADARP55265 1226 aaKnown RBP12.08□□□□□ -0.48
PRKDC-207ENST00000536483 PRAMEP78395 509 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 BASP1P80723 227 aaKnown RBP12.08□□□□□ -0.48
PRKDC-207ENST00000536483 SARNPP82979 210 aaKnown RBP12.08□□□□□ -0.48
PRKDC-207ENST00000536483 SEMA3AQ14563 771 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 KCNAB1Q14722 419 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 FASTKD1Q53R41 847 aaKnown RBP12.08□□□□□ -0.48
PRKDC-207ENST00000536483 PAPD7Q5XG87 772 aaKnown RBP12.08□□□□□ -0.48
PRKDC-207ENST00000536483 PWWP2BQ6NUJ5 590 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 CYB5D1Q6P9G0 228 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 CCDC137Q6PK04 289 aaKnown RBP12.08□□□□□ -0.48
PRKDC-207ENST00000536483 MICALCLQ6ZW33 695 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 CAND1Q86VP6 1230 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms