RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 LOC730098B7Z3J9 87 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 GFRA2O00451 464 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 CLDN7O95471 211 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 BPIP17213 487 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 HOXB6P17509 224 aaKnown RBP15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 UGT1A1P22309 533 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 UGT1A4P22310 534 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 UGT1A3P35503 534 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 UGT1A5P35504 534 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 HNF1BP35680 557 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 PIK3CGP48736 1102 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 HMGCS1Q01581 520 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 IMPG1Q17R60 797 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 TTLL9Q3SXZ7 439 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 RUNDC3AQ59EK9 446 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 TTC23LQ6PF05 361 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 RNF168Q8IYW5 571 aaPredicted RBP15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 RGL4Q8IZJ4 473 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 SVOPLQ8N434 492 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 LIX1Q8N485 282 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 USP7Q93009 1102 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 ACDQ96AP0 544 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 HPS4Q9NQG7 708 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 LIMD1Q9UGP4 676 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 CRLS1Q9UJA2 301 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 FAF1Q9UNN5 650 aaPredicted RBP15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 PIKFYVEQ9Y2I7 2098 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 MANBAO00462 879 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 STK16O75716 305 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 CST1P01037 141 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 EEF1B2P24534 225 aaKnown RBP15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 HOXD10P28358 340 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 YAP1P46937 504 aaKnown RBP15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 PTPN5P54829 565 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 TUBA3CQ13748 450 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 VEPH1Q14D04 833 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 SPANXN4Q5MJ08 99 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 RBM48Q5RL73 367 aaKnown RBP15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 GRAMD4Q6IC98 578 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 ULK4Q96C45 1275 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 THAP11Q96EK4 314 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 OR52E6Q96RD3 313 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 DCUN1D5Q9BTE7 237 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 OSBPL10Q9BXB5 764 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 ZFP14Q9HCL3 533 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 C1orf109Q9NX04 203 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 SLC25A37Q9NYZ2 338 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 EVLQ9UI08 416 aaPredicted RBP15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 INVSQ9Y283 1065 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 MAGED1Q9Y5V3 778 aaPredicted RBP15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 ANAPC1Q9H1A4 1944 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 AGAP14A8MT82 685 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 SMAD6O43541 496 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 GREM1O60565 184 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 PFDN1O60925 122 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 SOCS5O75159 536 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 RETP07949 1114 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 CBSLP0DN79 551 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 ELK4P28324 431 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 CBSP35520 551 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 NEDD8Q15843 81 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 CDKL4Q5MAI5 379 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 BROXQ5VW32 411 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 ATG9BQ674R7 924 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 ENPP6Q6UWR7 440 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 CHST15Q7LFX5 561 aaPredicted RBP15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 DNAJB7Q7Z6W7 309 aaPredicted RBP15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 MSRB3Q8IXL7 192 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 C8orf59Q8N0T1 100 aaPredicted RBP15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 PAF1Q8N7H5 531 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 OR13F1Q8NGS4 319 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 OR6K2Q8NGY2 324 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 FBXO30Q8TB52 745 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 PHF12Q96QT6 1004 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 VN1R3Q9BXE9 311 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 SLC29A3Q9BZD2 475 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 IKZF5Q9H5V7 419 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 FAM118AQ9NWS6 357 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 YIPF1Q9Y548 306 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 PITPNM1O00562 1244 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 CXCR6O00574 342 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 ERN1O75460 977 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 CLDN9O95484 217 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 KRT6AP02538 564 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 KRT6BP04259 564 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 PCSK2P16519 638 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 KRT6CP48668 564 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 GALK1P51570 392 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 TMBIM6P55061 237 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 CHRNA6Q15825 494 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 TCTN1Q2MV58 587 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 USP39Q53GS9 565 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 KLHL35Q6PF15 583 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 NXPE1Q8N323 547 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 KRTCAP2Q8N6L1 136 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 FAM86B1Q8N7N1 296 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 PJA1Q8NG27 643 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 WFDC5Q8TCV5 224 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 NRBF2Q96F24 287 aa15.69■□□□□ 0.1
CHMP1A-202ENST00000535997 SLC47A1Q96FL8 570 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms