RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CCDC89Q8N998 374 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 OR1L3Q8NH93 324 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 LRRC45Q96CN5 670 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 PITPNM3Q9BZ71 974 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 TFB2MQ9H5Q4 396 aaKnown RBP17.27■□□□□ 0.36
SMG1-203ENST00000532700 PDE7BQ9NP56 450 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 TREX1Q9NSU2 369 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 SOHLH2Q9NX45 425 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 TTC7AQ9ULT0 858 aaPredicted RBP17.27■□□□□ 0.36
SMG1-203ENST00000532700 COLEC10Q9Y6Z7 277 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 TLN1Q9Y490 2541 aaKnown RBP17.26■□□□□ 0.35
SMG1-203ENST00000532700 TNRC6AQ8NDV7 1962 aaKnown RBP17.26■□□□□ 0.35
SMG1-203ENST00000532700 CEP104O60308 925 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 KATNA1O75449 491 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 ZBTB11O95625 1053 aaPredicted RBP17.26■□□□□ 0.35
SMG1-203ENST00000532700 NR1D1P20393 614 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 CDH3P22223 829 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 TUBB4BP68371 445 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 BASP1P80723 227 aaKnown RBP17.26■□□□□ 0.35
SMG1-203ENST00000532700 RPA4Q13156 261 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 KCNAB2Q13303 367 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 DNASE1L3Q13609 305 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 TUBB2AQ13885 445 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 DRICH1Q6PGQ1 229 aaPredicted RBP17.26■□□□□ 0.35
SMG1-203ENST00000532700 PTRH1Q86Y79 214 aaKnown RBP17.26■□□□□ 0.35
SMG1-203ENST00000532700 KMT5CQ86Y97 462 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 TMEM151BQ8IW70 566 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 OR6P1Q8NGX9 317 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 OR4L1Q8NH43 312 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 MAIP1Q8WWC4 291 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 MS4A14Q96JA4 679 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 TRAPPC9Q96Q05 1148 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 TUBB2BQ9BVA1 445 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 TWSG1Q9GZX9 223 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 MVB12BQ9H7P6 319 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 FAM60AQ9NP50 221 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 SYBUQ9NX95 663 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 RIMKLBQ9ULI2 386 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 DRG1Q9Y295 367 aaKnown RBP17.26■□□□□ 0.35
SMG1-203ENST00000532700 HEBP2Q9Y5Z4 205 aa17.26■□□□□ 0.35
SMG1-203ENST00000532700 J3QKU1 62 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 IFRD1O00458 451 aaPredicted RBP17.25■□□□□ 0.35
SMG1-203ENST00000532700 LIN7AO14910 233 aaPredicted RBP17.25■□□□□ 0.35
SMG1-203ENST00000532700 SCRG1O75711 98 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 TCN2P20062 427 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 MGAT1P26572 445 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 ARL4DP49703 201 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 IL10RAQ13651 578 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 ANKRD22Q5VYY1 191 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 ARMC6Q6NXE6 501 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 UNC5AQ6ZN44 842 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 CDHR3Q6ZTQ4 885 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 AMIGO1Q86WK6 493 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 MPP5Q8N3R9 675 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 MENTQ9BUN1 341 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 ACTL8Q9H568 366 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 EIF2B3Q9NR50 452 aaKnown RBP17.25■□□□□ 0.35
SMG1-203ENST00000532700 ACTR10Q9NZ32 417 aa17.25■□□□□ 0.35
SMG1-203ENST00000532700 GOLGA8KD6RF30 607 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 GOLGA8TH3BQL2 631 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 AVILO75366 819 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 UGT2B7P16662 529 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 CCR10P46092 362 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 GABRA4P48169 554 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 VPS41P49754 854 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 ACY1Q03154 408 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 GRB7Q14451 532 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 DEFB110Q30KQ9 67 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 TMEM126BQ8IUX1 230 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 PPHLN1Q8NEY8 458 aaKnown RBP17.24■□□□□ 0.35
SMG1-203ENST00000532700 MFSD3Q96ES6 412 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 PBKQ96KB5 322 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 OR2A14Q96R47 310 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 SLC25A18Q9H1K4 315 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 VPS37BQ9H9H4 285 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 ZNF71Q9NQZ8 489 aaPredicted RBP17.24■□□□□ 0.35
SMG1-203ENST00000532700 C1GALT1Q9NS00 363 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 KCND1Q9NSA2 647 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 PADI1Q9ULC6 663 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 RUVBL2Q9Y230 463 aaKnown RBP17.24■□□□□ 0.35
SMG1-203ENST00000532700 ASF1AQ9Y294 204 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 TDRKHQ9Y2W6 561 aaKnown RBP17.24■□□□□ 0.35
SMG1-203ENST00000532700 KCNMB2Q9Y691 235 aa17.24■□□□□ 0.35
SMG1-203ENST00000532700 CDC14CA4D256 554 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 TMEM150CB9EJG8 249 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 H3BMH7 237 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 SUV39H1O43463 412 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 CREG1O75629 220 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 DNAJB5O75953 348 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 TMEM63AO94886 807 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 FTH1P02794 183 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 CAPN1P07384 714 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 PRKAA1Q13131 559 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 KCNJ11Q14654 390 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 FASTKD1Q53R41 847 aaKnown RBP17.23■□□□□ 0.35
SMG1-203ENST00000532700 PCID2Q5JVF3 399 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 CTSL3PQ5NE16 218 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 PLEKHS1Q5SXH7 462 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 SPESP1Q6UW49 350 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 ZNF517Q6ZMY9 492 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms