RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 TDRKHQ9Y2W6 561 aaKnown RBP16.73■□□□□ 0.27
PHRF1-204ENST00000532550 PCDHB3Q9Y5E6 796 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 BAHCC1Q9P281 2608 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 C2orf74A8MZ97 194 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 BHMG1C9JSJ3 638 aaPredicted RBP16.72■□□□□ 0.27
PHRF1-204ENST00000532550 BTN3A1O00481 513 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 PRMT5O14744 637 aaPredicted RBP16.72■□□□□ 0.27
PHRF1-204ENST00000532550 KDM1AO60341 852 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 NDUFS3O75489 264 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 NTRK1P04629 796 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 TCN2P20062 427 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 NMBRP28336 390 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 CSE1LP55060 971 aaKnown RBP16.72■□□□□ 0.27
PHRF1-204ENST00000532550 HSPA14Q0VDF9 509 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 GPR19Q15760 415 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 SDCCAG8Q86SQ7 713 aaPredicted RBP16.72■□□□□ 0.27
PHRF1-204ENST00000532550 HOOK3Q86VS8 718 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 REXO1L1PQ8IX06 675 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 OTUD6BQ8N6M0 293 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 ASZ1Q8WWH4 475 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 PPM1MQ96MI6 270 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 KIFC1Q9BW19 673 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 FANCEQ9HB96 536 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 MRM3Q9HC36 420 aaKnown RBP16.72■□□□□ 0.27
PHRF1-204ENST00000532550 KCND3Q9UK17 655 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 CROTQ9UKG9 612 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 BTRCQ9Y297 605 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 SPTBP11277 2137 aa16.72■□□□□ 0.27
PHRF1-204ENST00000532550 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.71■□□□□ 0.27
PHRF1-204ENST00000532550 TCRBV7S3A2A0A539 114 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 KATNA1O75449 491 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 TIAF1O95411 115 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 APOA4P06727 396 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 FAM87AP0C7U9 286 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 PRKAR1AP10644 381 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 CCR7P32248 378 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 SHMT2P34897 504 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 COILP38432 576 aaPredicted RBP16.71■□□□□ 0.27
PHRF1-204ENST00000532550 CCR10P46092 362 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 KCTD19Q17RG1 926 aaPredicted RBP16.71■□□□□ 0.27
PHRF1-204ENST00000532550 PTRHD1Q6GMV3 140 aaKnown RBP16.71■□□□□ 0.27
PHRF1-204ENST00000532550 C16orf46Q6P387 395 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 CCDC137Q6PK04 289 aaKnown RBP16.71■□□□□ 0.27
PHRF1-204ENST00000532550 TMEM126BQ8IUX1 230 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 ADGRF3Q8IZF5 1079 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 SLC35F6Q8N357 371 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 MPP5Q8N3R9 675 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 OR5K2Q8NHB8 316 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 STARD8Q92502 1023 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 ZNF501Q96CX3 271 aaPredicted RBP16.71■□□□□ 0.27
PHRF1-204ENST00000532550 NRTNQ99748 197 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 SYTL2Q9HCH5 934 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 LHX9Q9NQ69 397 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 SYBUQ9NX95 663 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 ACTR10Q9NZ32 417 aa16.71■□□□□ 0.27
PHRF1-204ENST00000532550 MARCH4Q9P2E8 410 aaPredicted RBP16.71■□□□□ 0.27
PHRF1-204ENST00000532550 PIPSLA2A3N6 862 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 IQCF5A8MTL0 148 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 B8ZZF3 427 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 PGRMC1O00264 195 aaKnown RBP16.7■□□□□ 0.26
PHRF1-204ENST00000532550 PFDN6O15212 129 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 KIF5CO60282 957 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 SCRG1O75711 98 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 VAPBO95292 243 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 F8A1P23610 371 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 KCNJ11Q14654 390 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 DNAJC21Q5F1R6 531 aaKnown RBP16.7■□□□□ 0.26
PHRF1-204ENST00000532550 MRNIPQ6NTE8 343 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 TTC27Q6P3X3 843 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 CASC4Q6P4E1 433 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 CES3Q6UWW8 571 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 UNC5AQ6ZN44 842 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 SLC22A15Q8IZD6 547 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 GSDMBQ8TAX9 411 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 ANP32BQ92688 251 aaKnown RBP16.7■□□□□ 0.26
PHRF1-204ENST00000532550 MFSD3Q96ES6 412 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 PANX3Q96QZ0 392 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 OSBPL9Q96SU4 736 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 TRMT1Q9NXH9 659 aaKnown RBP16.7■□□□□ 0.26
PHRF1-204ENST00000532550 GNPTGQ9UJJ9 305 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 SOX13Q9UN79 622 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 ICKQ9UPZ9 632 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 MRPS18BQ9Y676 258 aaKnown RBP16.7■□□□□ 0.26
PHRF1-204ENST00000532550 SEC16AO15027 2179 aa16.7■□□□□ 0.26
PHRF1-204ENST00000532550 MAGEB16A2A368 324 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 KPNA5O15131 536 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 CPNE3O75131 537 aaKnown RBP16.69■□□□□ 0.26
PHRF1-204ENST00000532550 AVILO75366 819 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 GPC4O75487 556 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 RPN2P04844 631 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 ST6GAL1P15907 406 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 AOAHP28039 575 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 MAGEA6P43360 314 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 CDC20Q12834 499 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 ABRQ12979 859 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 TMED2Q15363 201 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 CYP1B1Q16678 543 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 CRTC2Q53ET0 693 aaPredicted RBP16.69■□□□□ 0.26
PHRF1-204ENST00000532550 ARMC3Q5W041 872 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 SPESP1Q6UW49 350 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms