RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 FOXQ1Q9C009 403 aa9.65□□□□□ -0.86
CTNND1-228ENST00000531007 COG4Q9H9E3 785 aa9.65□□□□□ -0.86
CTNND1-228ENST00000531007 SLCO1B3Q9NPD5 702 aa9.65□□□□□ -0.86
CTNND1-228ENST00000531007 PFDN4Q9NQP4 134 aa9.65□□□□□ -0.86
CTNND1-228ENST00000531007 CD274Q9NZQ7 290 aa9.65□□□□□ -0.86
CTNND1-228ENST00000531007 CDYLQ9Y232 598 aa9.65□□□□□ -0.86
CTNND1-228ENST00000531007 APOBEC2Q9Y235 224 aaKnown RBP9.65□□□□□ -0.86
CTNND1-228ENST00000531007 IGHV1OR15-9A0A0B4J2B8 117 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 A0A1W2PPC4 97 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 PRR23AA6NEV1 266 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 UBXN8O00124 270 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 EBAG9O00559 213 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 GIPC1O14908 333 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 KDM1AO60341 852 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 NDUFS2O75306 463 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 DCTN3O75935 186 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 SUPT7LO94864 414 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 FGF4P08620 206 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 ALOX15P16050 662 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-228ENST00000531007 HSD17B2P37059 387 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 KCNC1P48547 511 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 RPL14P50914 215 aaKnown RBP9.64□□□□□ -0.87
CTNND1-228ENST00000531007 PGGT1BP53609 377 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 PKNOX1P55347 436 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 PFN3P60673 137 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 PPP2CBP62714 309 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 PPP2CAP67775 309 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 PPARDQ03181 441 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 CDC16Q13042 620 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 PFKFB4Q16877 469 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 SPDYAQ5MJ70 313 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 METRNLQ641Q3 311 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 UBE2R2Q712K3 238 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-228ENST00000531007 ABI3BPQ7Z7G0 1075 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 C11orf96Q7Z7L8 435 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 IQCHQ86VS3 1027 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 ZNF547Q8IVP9 402 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 CFAP206Q8IYR0 622 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 PELI3Q8N2H9 469 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 CCNYL1Q8N7R7 359 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 GBP7Q8N8V2 638 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-228ENST00000531007 KDF1Q8NAX2 398 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-228ENST00000531007 TMEM145Q8NBT3 493 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 FLCNQ8NFG4 579 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 OR56A4Q8NGH8 313 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 SKA2Q8WVK7 121 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-228ENST00000531007 EDAQ92838 391 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 ERLEC1Q96DZ1 483 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 CCDC97Q96F63 343 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-228ENST00000531007 SEC16BQ96JE7 1060 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 CCDC138Q96M89 665 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 WDR92Q96MX6 357 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 TMEM237Q96Q45 408 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 FAM107BQ9H098 131 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 WWP1Q9H0M0 922 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 MUTYHQ9UIF7 546 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 PTBP2Q9UKA9 531 aaKnown RBP9.64□□□□□ -0.87
CTNND1-228ENST00000531007 CYP8B1Q9UNU6 501 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 PCDHB11Q9Y5F2 797 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 USH1CQ9Y6N9 552 aa9.64□□□□□ -0.87
CTNND1-228ENST00000531007 PIKFYVEQ9Y2I7 2098 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 TRPC5OSA6NMA1 111 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 ZNF839A8K0R7 811 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 IFRD1O00458 451 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-228ENST00000531007 SLC31A1O15431 190 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 KATNA1O75449 491 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 IGHV4-34P06331 123 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 CEACAM5P06731 702 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 RPS17P08708 135 aaKnown RBP9.63□□□□□ -0.87
CTNND1-228ENST00000531007 VSIG8P0DPA2 414 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 MAT2AP31153 395 aaKnown RBP9.63□□□□□ -0.87
CTNND1-228ENST00000531007 GMPRP36959 345 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 THOP1P52888 689 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 ARFIP2P53365 341 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 IRX1P78414 480 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-228ENST00000531007 CTBSQ01459 385 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 LCP2Q13094 533 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 MTAPQ13126 283 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 PYCR3Q53H96 274 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 ARL13AQ5H913 290 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-228ENST00000531007 NAPRTQ6XQN6 538 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 ZCCHC23Q6ZST2 131 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 LPCAT2Q7L5N7 544 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 LRRC70Q7Z2Q7 622 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 PDZD3Q86UT5 571 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 KLHDC8AQ8IYD2 350 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 RNF217Q8TC41 542 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 ZNF483Q8TF39 744 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-228ENST00000531007 BIRC7Q96CA5 298 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 FBXL8Q96CD0 374 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 PHF21BQ96EK2 531 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 HHIPQ96QV1 700 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 SORT1Q99523 831 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 EGFL8Q99944 293 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 LGR4Q9BXB1 951 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 CD244Q9BZW8 370 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 GSTO2Q9H4Y5 243 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 TRNAU1APQ9NX07 287 aaKnown RBP9.63□□□□□ -0.87
CTNND1-228ENST00000531007 DNAJC28Q9NX36 388 aa9.63□□□□□ -0.87
CTNND1-228ENST00000531007 ARL15Q9NXU5 204 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms