RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PEX13Q92968 403 aa18.01■□□□□ 0.47
CAPN1-203ENST00000525013 LHX9Q9NQ69 397 aa18.01■□□□□ 0.47
CAPN1-203ENST00000525013 KCND1Q9NSA2 647 aa18.01■□□□□ 0.47
CAPN1-203ENST00000525013 CATSPERZQ9NTU4 200 aa18.01■□□□□ 0.47
CAPN1-203ENST00000525013 TTC7AQ9ULT0 858 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-203ENST00000525013 BTRCQ9Y297 605 aa18.01■□□□□ 0.47
CAPN1-203ENST00000525013 TDRKHQ9Y2W6 561 aaKnown RBP18.01■□□□□ 0.47
CAPN1-203ENST00000525013 HEMK1Q9Y5R4 338 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-203ENST00000525013 SLC5A10A0PJK1 596 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 C2orf74A8MZ97 194 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 AP3B1O00203 1094 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 CD3EAPO15446 510 aaKnown RBP18■□□□□ 0.47
CAPN1-203ENST00000525013 OAS2P29728 719 aaKnown RBP18■□□□□ 0.47
CAPN1-203ENST00000525013 NPY2RP49146 381 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 VPS41P49754 854 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 POLE2P56282 527 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 ATP1A1-AS1Q5TC04 95 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 PRICKLE2Q7Z3G6 844 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 HOOK3Q86VS8 718 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 OTUD6BQ8N6M0 293 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 PRELID2Q8N945 189 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 CT55Q8WUE5 264 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 TSSK1BQ9BXA7 367 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 IL22Q9GZX6 179 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 KLHL25Q9H0H3 589 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 FANCEQ9HB96 536 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 GEMIN8Q9NWZ8 242 aaKnown RBP18■□□□□ 0.47
CAPN1-203ENST00000525013 MARCH4Q9P2E8 410 aaPredicted RBP18■□□□□ 0.47
CAPN1-203ENST00000525013 KCND3Q9UK17 655 aa18■□□□□ 0.47
CAPN1-203ENST00000525013 BHMG1C9JSJ3 638 aaPredicted RBP17.99■□□□□ 0.47
CAPN1-203ENST00000525013 SLC28A2O43868 658 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 SCRG1O75711 98 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 PVRP15151 417 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 MGAT1P26572 445 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 ACADLP28330 430 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 TTPAP49638 278 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 HSPA14Q0VDF9 509 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 DNASE1L3Q13609 305 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 ERV3-1Q14264 604 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 TBC1D21Q8IYX1 336 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 ADGRF3Q8IZF5 1079 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 OR8K5Q8NH50 307 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 ZNF501Q96CX3 271 aaPredicted RBP17.99■□□□□ 0.47
CAPN1-203ENST00000525013 SGSM3Q96HU1 749 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 ADNPQ9H2P0 1102 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 STARD5Q9NSY2 213 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 ACTR10Q9NZ32 417 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 POLG2Q9UHN1 485 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 ICKQ9UPZ9 632 aa17.99■□□□□ 0.47
CAPN1-203ENST00000525013 PIPSLA2A3N6 862 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 IQCF5A8MTL0 148 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 TMEM150CB9EJG8 249 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 CPNE3O75131 537 aaKnown RBP17.98■□□□□ 0.47
CAPN1-203ENST00000525013 ST6GAL1P15907 406 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 NMBRP28336 390 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 CCR7P32248 378 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 SHMT2P34897 504 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 CDK16Q00536 496 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 NFKB2Q00653 900 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 GPS1Q13098 491 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 KCNAB2Q13303 367 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 PTRHD1Q6GMV3 140 aaKnown RBP17.98■□□□□ 0.47
CAPN1-203ENST00000525013 FAM199XQ6PEV8 388 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-203ENST00000525013 UNC5AQ6ZN44 842 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 ASZ1Q8WWH4 475 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 MR1Q95460 341 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 MAGOHBQ96A72 148 aaKnown RBP17.98■□□□□ 0.47
CAPN1-203ENST00000525013 MS4A14Q96JA4 679 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 CARD6Q9BX69 1037 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 SLC25A18Q9H1K4 315 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 AKIRIN1Q9H9L7 192 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-203ENST00000525013 TREX1Q9NSU2 369 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 SYBUQ9NX95 663 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 PLAGL1Q9UM63 463 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 JRKLQ9Y4A0 524 aa17.98■□□□□ 0.47
CAPN1-203ENST00000525013 TCRBV7S3A2A0A539 114 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 J3QKU1 62 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 PRMT5O14744 637 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-203ENST00000525013 TERTO14746 1132 aaKnown RBP17.97■□□□□ 0.47
CAPN1-203ENST00000525013 KDM1AO60341 852 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 NDUFS3O75489 264 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 APOA4P06727 396 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 TPSB2P20231 275 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 TPSAB1Q15661 275 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 CRTC2Q53ET0 693 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-203ENST00000525013 LRRC8BQ6P9F7 803 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 SPESP1Q6UW49 350 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 CES3Q6UWW8 571 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 SLC22A15Q8IZD6 547 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 KRT222Q8N1A0 295 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 OR5K2Q8NHB8 316 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 CFAP61Q8NHU2 1237 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 LKAAEAR1Q8TD35 194 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 APOBEC4Q8WW27 367 aaKnown RBP17.97■□□□□ 0.47
CAPN1-203ENST00000525013 PBKQ96KB5 322 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 TRAPPC9Q96Q05 1148 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 AP1M1Q9BXS5 423 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 PITPNM3Q9BZ71 974 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 TWSG1Q9GZX9 223 aa17.97■□□□□ 0.47
CAPN1-203ENST00000525013 CDC14CA4D256 554 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms