RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 MROH6A6NGR9 719 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 BTNL10A8MVZ5 291 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 TPM3P06753 285 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 ZSCAN5DPP0CG00 497 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 MSH3P20585 1137 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 ACRV1P26436 265 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 ACADLP28330 430 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 ITGA1P56199 1179 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 YBX1P67809 324 aaKnown RBP8.38□□□□□ -1.07
PABPC1-202ENST00000517403 PRKG2Q13237 762 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 ITGA9Q13797 1035 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 GTF2H3Q13889 308 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 BOP1Q14137 746 aaKnown RBP8.38□□□□□ -1.07
PABPC1-202ENST00000517403 IL11RAQ14626 422 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 BRD3Q15059 726 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 PLCL1Q15111 1095 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 OASLQ15646 514 aaKnown RBP8.38□□□□□ -1.07
PABPC1-202ENST00000517403 LACTB2Q53H82 288 aaPredicted RBP8.38□□□□□ -1.07
PABPC1-202ENST00000517403 DARS2Q6PI48 645 aaKnown RBP8.38□□□□□ -1.07
PABPC1-202ENST00000517403 PPP1R3BQ86XI6 285 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 CDKL3Q8IVW4 592 aaPredicted RBP8.38□□□□□ -1.07
PABPC1-202ENST00000517403 CFAP206Q8IYR0 622 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 CCDC170Q8IYT3 715 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 ZSCAN1Q8NBB4 408 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 SIDT2Q8NBJ9 832 aaKnown RBP8.38□□□□□ -1.07
PABPC1-202ENST00000517403 OR52K1Q8NGK4 314 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 HM13Q8TCT9 377 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 APOBEC4Q8WW27 367 aaKnown RBP8.38□□□□□ -1.07
PABPC1-202ENST00000517403 KIAA1143Q96AT1 154 aaPredicted RBP8.38□□□□□ -1.07
PABPC1-202ENST00000517403 STAMBPL1Q96FJ0 436 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 PANX2Q96RD6 677 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 ZPBPQ9BS86 351 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 MLXIPLQ9NP71 852 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 SLC22A11Q9NSA0 550 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 NLE1Q9NVX2 485 aaPredicted RBP8.38□□□□□ -1.07
PABPC1-202ENST00000517403 HRASLS2Q9NWW9 162 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 RUVBL2Q9Y230 463 aaKnown RBP8.38□□□□□ -1.07
PABPC1-202ENST00000517403 PKP3Q9Y446 797 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 NBASA2RRP1 2371 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 C5orf60A6NFR6 353 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 ARGFXA6NJG6 315 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 IQCF5A8MTL0 148 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 H7C0S8 307 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 ALOX12BO75342 701 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 SCRG1O75711 98 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 ANXA9O76027 345 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 SORBS2O94875 1100 aaKnown RBP8.37□□□□□ -1.07
PABPC1-202ENST00000517403 SLC35G4P0C7Q5 338 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 ARNTP27540 789 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 HALP42357 657 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 LSM11P83369 360 aaKnown RBP eCLIP8.37□□□□□ -1.07
PABPC1-202ENST00000517403 SEMA5AQ13591 1074 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 SEPT6Q14141 434 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 LONRF2Q1L5Z9 754 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 CCSMST1Q4G0I0 132 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 SNX20Q7Z614 316 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 ZBTB2Q8N680 514 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 ENDOVQ8N8Q3 282 aaKnown RBP8.37□□□□□ -1.07
PABPC1-202ENST00000517403 LINC01555Q8NAE3 123 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 BRSK1Q8TDC3 778 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 INPP5DQ92835 1189 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 COL26A1Q96A83 441 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 ZDHHC12Q96GR4 267 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 CDKN2AIPNLQ96HQ2 116 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 MRFAP1L1Q96HT8 127 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 HES6Q96HZ4 224 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 IL17FQ96PD4 163 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 TRAPPC9Q96Q05 1148 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 OR2A14Q96R47 310 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 NUDT9Q9BW91 350 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 KRTAP3-3Q9BYR6 98 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 KRTAP3-2Q9BYR7 98 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 HAUS2Q9NVX0 235 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 ZDHHC3Q9NYG2 299 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 CRLS1Q9UJA2 301 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 RARRES3Q9UL19 164 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 EFR3BQ9Y2G0 817 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 CSAG2Q9Y5P2 127 aa8.37□□□□□ -1.07
PABPC1-202ENST00000517403 USP9XQ93008 2570 aaPredicted RBP8.36□□□□□ -1.07
PABPC1-202ENST00000517403 UTP20O75691 2785 aaKnown RBP8.36□□□□□ -1.07
PABPC1-202ENST00000517403 SLC5A10A0PJK1 596 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 CCDC66A2RUB6 948 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 TMEM229AB2RXF0 380 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 TMEM150CB9EJG8 249 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 ZW10O43264 779 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 LIASO43766 372 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 CEACAM4O75871 244 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 AP2A1O95782 977 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 TPM1P09493 284 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 CBSLP0DN79 551 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 ATP1B2P14415 290 aaPredicted RBP8.36□□□□□ -1.07
PABPC1-202ENST00000517403 UGT2B7P16662 529 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 PTPN4P29074 926 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 PRDX3P30048 256 aaKnown RBP8.36□□□□□ -1.07
PABPC1-202ENST00000517403 CBSP35520 551 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 RWDD2BP57060 319 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 TUBB4BP68371 445 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 CRADDP78560 199 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 HSD11B2P80365 405 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 RAPSNQ13702 412 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms