RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 TMEM202A6NGA9 273 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 E2F3O00716 465 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 AZIN1O14977 448 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 CCNT2O60583 730 aaKnown RBP15.62■□□□□ 0.09
NUP54-214ENST00000514307 VPS4BO75351 444 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 ATP5HO75947 161 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 UROSP10746 265 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 PDHA2P29803 388 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 AGTR2P50052 363 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 PFN3P60673 137 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 SH3BP2P78314 561 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 ZXDAP98168 799 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 PYCR3Q53H96 274 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 FOXR1Q6PIV2 292 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 ENPP7Q6UWV6 458 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 GPRIN3Q6ZVF9 776 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 CHST15Q7LFX5 561 aaPredicted RBP15.62■□□□□ 0.09
NUP54-214ENST00000514307 MILR1Q7Z6M3 343 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 MTDHQ86UE4 582 aaKnown RBP15.62■□□□□ 0.09
NUP54-214ENST00000514307 TEX9Q8N6V9 391 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 PHC3Q8NDX5 983 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 RAD51AP1Q96B01 352 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 ZNF382Q96SR6 550 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 UHRF1Q96T88 793 aaPredicted RBP15.62■□□□□ 0.09
NUP54-214ENST00000514307 C6orf106Q9H6K1 298 aaPredicted RBP15.62■□□□□ 0.09
NUP54-214ENST00000514307 IPPKQ9H8X2 491 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 FZD3Q9NPG1 666 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 ACSS2Q9NR19 701 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 EIF2B4Q9UI10 523 aaKnown RBP15.62■□□□□ 0.09
NUP54-214ENST00000514307 LNPEPQ9UIQ6 1025 aa15.62■□□□□ 0.09
NUP54-214ENST00000514307 ZNF106Q9H2Y7 1883 aaKnown RBP15.62■□□□□ 0.09
NUP54-214ENST00000514307 GOLGA8QA0A0J9YX86 632 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 GOLGA8OA6NCC3 632 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 POM121BA6NF01 834 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 ZNF839A8K0R7 811 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 C10orf142B7Z368 130 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 GOLGA8NF8WBI6 632 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 ZNF195O14628 629 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 MAP3K13O43283 966 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 KDM1AO60341 852 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 C1orf105O95561 183 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 SLC35G4P0C7Q5 338 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 ACADLP28330 430 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 CCR10P46092 362 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 HSPA7P48741 367 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 CLDN2P57739 230 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 NFE2L1Q14494 772 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 Q6ZSR6 202 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 LRRC70Q7Z2Q7 622 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 RAB42Q8N4Z0 105 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 OR9A1PQ8NGU1 263 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 CEP70Q8NHQ1 597 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 AGR3Q8TD06 166 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 TFGQ92734 400 aaPredicted RBP15.61■□□□□ 0.09
NUP54-214ENST00000514307 SKA1Q96BD8 255 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 BIRC7Q96CA5 298 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 SPACA7Q96KW9 195 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 NECAB3Q96P71 396 aaPredicted RBP15.61■□□□□ 0.09
NUP54-214ENST00000514307 NUSAP1Q9BXS6 441 aaKnown RBP15.61■□□□□ 0.09
NUP54-214ENST00000514307 OR52A5Q9H2C5 316 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 NOL11Q9H8H0 719 aaKnown RBP15.61■□□□□ 0.09
NUP54-214ENST00000514307 SAR1AQ9NR31 198 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 KLC4Q9NSK0 619 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 GULP1Q9UBP9 304 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 SLC23A2Q9UGH3 650 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 ZFP69BQ9UJL9 534 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 SUFUQ9UMX1 484 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 PRKAB1Q9Y478 270 aa15.61■□□□□ 0.09
NUP54-214ENST00000514307 MYO10Q9HD67 2058 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 IGHV1OR15-9A0A0B4J2B8 117 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 A0A1W2PPC4 97 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 LRRC14BA6NHZ5 514 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 METTL12A8MUP2 240 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 UBFD1O14562 309 aaKnown RBP15.6■□□□□ 0.09
NUP54-214ENST00000514307 HGSO14964 777 aaPredicted RBP15.6■□□□□ 0.09
NUP54-214ENST00000514307 AXIN1O15169 862 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 TNFP01375 233 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 IGHV4-34P06331 123 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 ENO1P06733 434 aaKnown RBP15.6■□□□□ 0.09
NUP54-214ENST00000514307 SERPINA6P08185 405 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 EBLN1P0CF75 366 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 TSPAN8P19075 237 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 ARL1P40616 181 aaPredicted RBP15.6■□□□□ 0.09
NUP54-214ENST00000514307 CLCNKAP51800 687 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 CCNG1P51959 295 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 MTAPQ13126 283 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 LRP8Q14114 963 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 KRT33BQ14525 404 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 TBCCQ15814 346 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 ATG14Q6ZNE5 492 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 GOLGA7Q7Z5G4 137 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 ABI3BPQ7Z7G0 1075 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 PDZD3Q86UT5 571 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 AGAP11Q8TF27 550 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 SETD7Q8WTS6 366 aaKnown RBP15.6■□□□□ 0.09
NUP54-214ENST00000514307 ESAMQ96AP7 390 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 OR2M4Q96R27 311 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 MYOCQ99972 504 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 NTMT1Q9BV86 223 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 TRIT1Q9H3H1 467 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms