RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PRR7Q8TB68 274 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 PNPLA2Q96AD5 504 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 OR2A14Q96R47 310 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 CCM2Q9BSQ5 444 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 HGH1Q9BTY7 390 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 FSD1LQ9BXM9 530 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 ZNF552Q9H707 407 aaPredicted RBP15.4■□□□□ 0.06
RAB40C-202ENST00000509637 CRLS1Q9UJA2 301 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 PCDHGB7Q9Y5F8 929 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 CSAG2Q9Y5P2 127 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 COLEC10Q9Y6Z7 277 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 ITPR2Q14571 2701 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 C17orf113A0A1B0GUU1 675 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 C2orf81A6NN90 581 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 DPM1O60762 260 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 LDLRP01130 860 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 TPH1P17752 444 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 ITGAXP20702 1163 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 ACADLP28330 430 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 OTX2P32243 289 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 NR6A1Q15406 480 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 KCTD11Q693B1 232 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 SNX20Q7Z614 316 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 MRGPREQ86SM8 312 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 SERPINA9Q86WD7 417 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 CCDC50Q8IVM0 306 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 TMEM102Q8N9M5 508 aaPredicted RBP15.39■□□□□ 0.05
RAB40C-202ENST00000509637 OR5AR1Q8NGP9 310 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 RBM41Q96IZ5 413 aaKnown RBP15.39■□□□□ 0.05
RAB40C-202ENST00000509637 GBP5Q96PP8 586 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 ARNT2Q9HBZ2 717 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 ZDHHC3Q9NYG2 299 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 GPR83Q9NYM4 423 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 CDYLQ9Y232 598 aa15.39■□□□□ 0.05
RAB40C-202ENST00000509637 POLEQ07864 2286 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 OR51F1A6NGY5 319 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 BHMG1C9JSJ3 638 aaPredicted RBP15.38■□□□□ 0.05
RAB40C-202ENST00000509637 APOC4-APOC2K7ER74 178 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 APOC2P02655 101 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 UMODP07911 640 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 UGT2B7P16662 529 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 CYP2A7P20853 494 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 MC4RP32245 332 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 MAGEA1P43355 309 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 GCGRP47871 477 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 PRKAA1Q13131 559 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 TRIM14Q14142 442 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 SLC9A5Q14940 896 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 DBN1Q16643 649 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 ODF2Q5BJF6 829 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 UNC5AQ6ZN44 842 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 MED25Q71SY5 747 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 PPP1R32Q7Z5V6 425 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 AMIGO1Q86WK6 493 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 TC2NQ8N9U0 490 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 TFGQ92734 400 aaPredicted RBP15.38■□□□□ 0.05
RAB40C-202ENST00000509637 COPS8Q99627 209 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 BARD1Q99728 777 aaKnown RBP15.38■□□□□ 0.05
RAB40C-202ENST00000509637 MESP1Q9BRJ9 268 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 SLAMF7Q9NQ25 335 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 ZNHIT6Q9NWK9 470 aaKnown RBP15.38■□□□□ 0.05
RAB40C-202ENST00000509637 CUEDC1Q9NWM3 386 aaPredicted RBP15.38■□□□□ 0.05
RAB40C-202ENST00000509637 PIH1D1Q9NWS0 290 aaKnown RBP15.38■□□□□ 0.05
RAB40C-202ENST00000509637 DHCR7Q9UBM7 475 aaKnown RBP15.38■□□□□ 0.05
RAB40C-202ENST00000509637 PLAGL1Q9UM63 463 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 DUSP10Q9Y6W6 482 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 DOPEY1Q5JWR5 2465 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 CROCCQ5TZA2 2017 aa15.38■□□□□ 0.05
RAB40C-202ENST00000509637 PRRC2CQ9Y520 2896 aaKnown RBP15.38■□□□□ 0.05
RAB40C-202ENST00000509637 ALOX12BO75342 701 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 ANXA9O76027 345 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 METTL18O95568 372 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 ACRV1P26436 265 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 DCTP40126 519 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 CD151P48509 253 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 KRT33BQ14525 404 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 MLIPQ5VWP3 458 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 SPESP1Q6UW49 350 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 DNAJC22Q8N4W6 341 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 DTWD1Q8N5C7 304 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 ALG3Q92685 438 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 DCUN1D1Q96GG9 259 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 SYTL2Q9HCH5 934 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 SERTAD3Q9UJW9 196 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 KLHL20Q9Y2M5 609 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 HEBP2Q9Y5Z4 205 aa15.37■□□□□ 0.05
RAB40C-202ENST00000509637 CREBBPQ92793 2442 aa15.36■□□□□ 0.05
RAB40C-202ENST00000509637 CCDC78A2IDD5 438 aa15.36■□□□□ 0.05
RAB40C-202ENST00000509637 KLHL33A6NCF5 533 aa15.36■□□□□ 0.05
RAB40C-202ENST00000509637 E7EQ34 232 aa15.36■□□□□ 0.05
RAB40C-202ENST00000509637 KCNN4O15554 427 aa15.36■□□□□ 0.05
RAB40C-202ENST00000509637 PJA2O43164 708 aa15.36■□□□□ 0.05
RAB40C-202ENST00000509637 RBP3P10745 1247 aa15.36■□□□□ 0.05
RAB40C-202ENST00000509637 PSMA3P25788 255 aa15.36■□□□□ 0.05
RAB40C-202ENST00000509637 EIF3EP60228 445 aaKnown RBP15.36■□□□□ 0.05
RAB40C-202ENST00000509637 BRD3Q15059 726 aa15.36■□□□□ 0.05
RAB40C-202ENST00000509637 DCAF10Q5QP82 559 aa15.36■□□□□ 0.05
RAB40C-202ENST00000509637 MRPL14Q6P1L8 145 aaKnown RBP15.36■□□□□ 0.05
RAB40C-202ENST00000509637 CUZD1Q86UP6 607 aa15.36■□□□□ 0.05
RAB40C-202ENST00000509637 C19orf47Q8N9M1 422 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms