RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 ASF1AQ9Y294 204 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 RPS6KL1Q9Y6S9 549 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 FAM169AQ9Y6X4 670 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 SEC16AO15027 2179 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 UBA6A0AVT1 1052 aaPredicted RBP15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 TLCD2A6NGC4 264 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 ZNF28P17035 718 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 WT1P19544 449 aaPredicted RBP15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 PAFAH1B1P43034 410 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 ADARP55265 1226 aaKnown RBP15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 HSD11B2P80365 405 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 ZNF789Q5FWF6 425 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 CTSL3PQ5NE16 218 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 MANEAQ5SRI9 462 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 UNC5AQ6ZN44 842 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 SYDE1Q6ZW31 735 aaPredicted RBP15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 KMT5CQ86Y97 462 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 CILP2Q8IUL8 1156 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 CARFQ8N187 725 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 C17orf53Q8N3J3 647 aaPredicted RBP15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 D2HGDHQ8N465 521 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 OR5K2Q8NHB8 316 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 BBC3Q96PG8 261 aaPredicted RBP15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 TSSK1BQ9BXA7 367 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 TRIT1Q9H3H1 467 aaKnown RBP15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 C1GALT1Q9NS00 363 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 SAMD15Q9P1V8 674 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 POMT2Q9UKY4 750 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 CRYL1Q9Y2S2 319 aa15.66■□□□□ 0.1
PDLIM5-212ENST00000509333 SPTBP11277 2137 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 TEX51A0A1B0GUA7 166 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 SLC9B1P1A6NJY1 282 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 CCDC188H7C350 402 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 BTN3A1O00481 513 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 KPNA5O15131 536 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 RAD1O60671 282 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 SPAG6O75602 509 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 STK17BO94768 372 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 USP1O94782 785 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 ZBTB11O95625 1053 aaPredicted RBP15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 APOA4P06727 396 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 PAMP19021 973 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 OGNP20774 298 aaKnown RBP15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 MAP4P27816 1152 aaKnown RBP15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 PRKAA1Q13131 559 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 KCNAB1Q14722 419 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 KYNUQ16719 465 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 MSS51Q4VC12 460 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 DNAJC21Q5F1R6 531 aaKnown RBP15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 VASH2Q86V25 355 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 HOOK3Q86VS8 718 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 BPHLQ86WA6 291 aaPredicted RBP15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 IGDCC3Q8IVU1 814 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 CACNA2D3Q8IZS8 1091 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 SIDT2Q8NBJ9 832 aaKnown RBP15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 ZNF669Q96BR6 464 aaPredicted RBP15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 RUNDC3BQ96NL0 473 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 FCRL4Q96PJ5 515 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 PANX3Q96QZ0 392 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 HGH1Q9BTY7 390 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 WDR70Q9NW82 654 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 IL1RAPL1Q9NZN1 696 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 GALPQ9UBC7 116 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 ASIC3Q9UHC3 531 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 GNPTGQ9UJJ9 305 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 ICKQ9UPZ9 632 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 MAD1L1Q9Y6D9 718 aa15.65■□□□□ 0.1
PDLIM5-212ENST00000509333 MATN2O00339 956 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 PFDN6O15212 129 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 TP73O15350 636 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 DLGAP3O95886 979 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 ESR1P03372 595 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 EBLN1P0CF75 366 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 PKMP14618 531 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 EIF3BP55884 814 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 ETF1P62495 437 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 DR1Q01658 176 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 CTBP1Q13363 440 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 GRB7Q14451 532 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 SYTL3Q4VX76 610 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 RNF187Q5TA31 235 aaPredicted RBP15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 PCSK4Q6UW60 755 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 NLGN4XQ8N0W4 816 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 OTUD6BQ8N6M0 293 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 NLGN4YQ8NFZ3 816 aaPredicted RBP15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 STAMBPL1Q96FJ0 436 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 ELMO2Q96JJ3 720 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 EBNA1BP2Q99848 306 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 MENTQ9BUN1 341 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 PITPNM3Q9BZ71 974 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 BTRCQ9Y297 605 aa15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 TDRKHQ9Y2W6 561 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-212ENST00000509333 LOC400499M0QZD8 3231 aa15.63■□□□□ 0.09
PDLIM5-212ENST00000509333 H3BMM5 538 aa15.63■□□□□ 0.09
PDLIM5-212ENST00000509333 TTI1O43156 1089 aa15.63■□□□□ 0.09
PDLIM5-212ENST00000509333 NIPSNAP2O75323 286 aa15.63■□□□□ 0.09
PDLIM5-212ENST00000509333 CDH3P22223 829 aa15.63■□□□□ 0.09
PDLIM5-212ENST00000509333 ATP1A2P50993 1020 aa15.63■□□□□ 0.09
PDLIM5-212ENST00000509333 ACY1Q03154 408 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms