RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 A0A0G2JNG1 304 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 GOLGA6L10A0A0M3HER8 536 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 CDRT15L2A8MXV6 281 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 C9orf172C9J069 976 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 KIR2DS3K7RE56 304 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 CD3EAPO15446 510 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 GPC4O75487 556 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 GAS8O95995 478 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 C9P02748 559 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 POLBP06746 335 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 CTSBP07858 339 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 TYRP1P17643 537 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 WT1P19544 449 aaPredicted RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 TNNT3P45378 269 aaPredicted RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 CAPZBP47756 277 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 NPY2RP49146 381 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 DUSP3P51452 185 aaPredicted RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 GABREP78334 506 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 SRSF11Q05519 484 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 SQSTM1Q13501 440 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 GTF2H3Q13889 308 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 COL9A2Q14055 689 aaPredicted RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 SPIDRQ14159 915 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 KIR2DS5Q14953 304 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 PPP1R7Q15435 360 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 SKIDA1Q1XH10 827 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 MAP9Q49MG5 647 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 HP1BP3Q5SSJ5 553 aaPredicted RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 RBM20Q5T481 1227 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 ZNF470Q6ECI4 717 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 C4orf22Q6V702 233 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 TMEM26Q6ZUK4 368 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 BTLAQ7Z6A9 289 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 PDZD3Q86UT5 571 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 PIM3Q86V86 326 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 HOOK3Q86VS8 718 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 CILP2Q8IUL8 1156 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 GALNT12Q8IXK2 581 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 GALNT15Q8N3T1 639 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 SVOPQ8N4V2 548 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 OR5AR1Q8NGP9 310 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 OR6P1Q8NGX9 317 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 GRK7Q8WTQ7 553 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 ZNF837Q96EG3 531 aaPredicted RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 STAMBPL1Q96FJ0 436 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 HSH2DQ96JZ2 352 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 DEPDC7Q96QD5 511 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 GFM1Q96RP9 751 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 NAP1L3Q99457 506 aaPredicted RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 MCMBPQ9BTE3 642 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 HGH1Q9BTY7 390 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 ZCCHC2Q9C0B9 1178 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 UCK1Q9HA47 277 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 XAB2Q9HCS7 855 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 FBXO6Q9NRD1 293 aaPredicted RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 ZDHHC18Q9NUE0 388 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 POT1Q9NUX5 634 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 IMP3Q9NV31 184 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 OCIAD1Q9NX40 245 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 NCKIPSDQ9NZQ3 722 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 PDP2Q9P2J9 529 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 DKK4Q9UBT3 224 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 CIDEBQ9UHD4 219 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 IKZF3Q9UKT9 509 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 PLAGL1Q9UM63 463 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 ICKQ9UPZ9 632 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 CHMP2BQ9UQN3 213 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 LOXL2Q9Y4K0 774 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 PSAT1Q9Y617 370 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 NFS1Q9Y697 457 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 TEX264Q9Y6I9 313 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 KNTC1P50748 2209 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 CACNA1BQ00975 2339 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 FER1L5A0AVI2 2057 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 BOD1L1Q8NFC6 3051 aa7.02□□□□□ -1.29
TOPBP1-207ENST00000509162 IGSF10Q6WRI0 2623 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 CACNA1GO43497 2377 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 SRRM3A6NNA2 597 aaPredicted RBP7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 RHPN2P1A8MT19 583 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 CCDC188H7C350 402 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 BTN3A3O00478 584 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 HCRTR1O43613 425 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 NRP2O60462 931 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 PRAMEF10O60809 474 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 USP1O94782 785 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 AP2A2O94973 939 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 CPNE6O95741 557 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 ERVK-10P10266 1014 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 FGF3P11487 239 aaPredicted RBP7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 JUPP14923 745 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 PGAM1P18669 254 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 OGNP20774 298 aaKnown RBP7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 RPS3P23396 243 aaKnown RBP eCLIP7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 ALDH4A1P30038 563 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 CASQ1P31415 396 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 ACTN2P35609 894 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 ELK3P41970 407 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 NSG1P42857 185 aa7.01□□□□□ -1.29
TOPBP1-207ENST00000509162 MAPK9P45984 424 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms