RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 TMEM150CB9EJG8 249 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 LIN7AO14910 233 aaPredicted RBP12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 PDGFAP04085 211 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 PVRP15151 417 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 MSNP26038 577 aaKnown RBP12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 NSG1P42857 185 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 LMAN1P49257 510 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 GSDMDP57764 484 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 KLRB1Q12918 225 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 PRKG2Q13237 762 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 ITIH4Q14624 930 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 OASLQ15646 514 aaKnown RBP12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 IGFBP7Q16270 282 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 CCDC38Q502W7 563 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 PLEKHS1Q5SXH7 462 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 LCN10Q6JVE6 187 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 FAM198BQ6UWH4 519 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 PACS1Q6VY07 963 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 AMIGO1Q86WK6 493 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 DSELQ8IZU8 1212 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 TXLNBQ8N3L3 684 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 OR52K1Q8NGK4 314 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 CPT1BQ92523 772 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 TRAPPC9Q96Q05 1148 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 KLHL25Q9H0H3 589 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 CHST8Q9H2A9 424 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 XKR8Q9H6D3 395 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 SMARCAL1Q9NZC9 954 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 ICKQ9UPZ9 632 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 PCSK5Q92824 1860 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 CCDC162PA2VCL2 907 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 ERI2A8K979 691 aaKnown RBP12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 C2orf74A8MZ97 194 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 MEN1O00255 615 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 PSMD3O43242 534 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 LIASO43766 372 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 SUN1O94901 812 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 ACADLP28330 430 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 RPS15P62841 145 aaKnown RBP12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 CDH17Q12864 832 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 SPESP1Q6UW49 350 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 CDHR3Q6ZTQ4 885 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 ASB18Q6ZVZ8 466 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 LINC00523Q86TU6 105 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 ENDOVQ8N8Q3 282 aaKnown RBP12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 OR5AR1Q8NGP9 310 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 ADAMTS17Q8TE56 1095 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 THAP4Q8WY91 577 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 ACTR5Q9H9F9 607 aaPredicted RBP12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 SYTL2Q9HCH5 934 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 PCMTD2Q9NV79 361 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 ACTR10Q9NZ32 417 aa12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 FARSAQ9Y285 508 aaKnown RBP12.6□□□□□ -0.39
HMGCS1-205ENST00000508319 SLC5A10A0PJK1 596 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 QSOX1O00391 747 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 OR1I1O60431 355 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 FTH1P02794 183 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 KLK3P07288 261 aaPredicted RBP12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 CAPN1P07384 714 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 RAB40ALP0C0E4 278 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 TPBGLP0DKB5 382 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 CYP2A7P20853 494 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 CDC25BP30305 580 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 GRIA1P42261 906 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 CHAF1BQ13112 559 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 FAM69BQ5VUD6 431 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 ZNF449Q6P9G9 518 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 NAPRTQ6XQN6 538 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 TRIM73Q86UV7 250 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 HOMEZQ8IX15 550 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 SYTL1Q8IYJ3 562 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 DNAAF3Q8N9W5 541 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 FLVCR1-AS1Q8TAF5 88 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 ELMO1Q92556 727 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 CLIP3Q96DZ5 547 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 ALS2CR12Q96Q35 445 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 NLNQ9BYT8 704 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 ETNK1Q9HBU6 452 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 IMPACTQ9P2X3 320 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 SLC2A6Q9UGQ3 507 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 TCFL5Q9UL49 500 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 RIMKLBQ9ULI2 386 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 SNX7Q9UNH6 387 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 PLAAQ9Y263 795 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 ASF1AQ9Y294 204 aa12.59□□□□□ -0.39
HMGCS1-205ENST00000508319 SPTBN1Q01082 2364 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 HEATR9A2RTY3 570 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 ARGFXA6NJG6 315 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 BHMG1C9JSJ3 638 aaPredicted RBP12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 H3BMH7 237 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 HCRTR1O43613 425 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 IFNB1P01574 187 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 UGT2B7P16662 529 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 STIP1P31948 543 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 SHMT2P34897 504 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 FDFT1P37268 417 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 PTGIRP43119 386 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 ITGA1P56199 1179 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 ACVR1Q04771 509 aa12.58□□□□□ -0.4
HMGCS1-205ENST00000508319 BRD3Q15059 726 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms