RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 AP1M2Q9Y6Q5 423 aa4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 PDCD11Q14690 1871 aaKnown RBP4.88□□□□□ -1.63
HMGB3P16-201ENST00000508037 CROCCQ5TZA2 2017 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 COL4A4P53420 1690 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 UBA6A0AVT1 1052 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 SERTM1A2A2V5 107 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 NPEPPSL1A6NEC2 478 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 EVPLLA8MZ36 301 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 E5RI56 91 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PTGES3LE9PB15 166 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 LOC110117498-PIK3R3F6TDL0 507 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TMX2-CTNND1H3BSU7 103 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PTGESO14684 152 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 WNT9AO14904 365 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ATXN7O15265 892 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 RAD51BO15315 384 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 MSI1O43347 362 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 CA12O43570 354 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 BNIP3LO60238 219 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 RAMP2O60895 175 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 JRKO75564 520 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 UPK1BO75841 260 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 CNTN5O94779 1100 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 MYO1DO94832 1006 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR4F21O95013 312 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 SNX4O95219 450 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 MED26O95402 600 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PEX11BO96011 259 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 F2P00734 622 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ESR1P03372 595 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 MMP2P08253 660 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ATXN1LP0C7T5 689 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 GSTT2P0CG29 244 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 GSTT2BP0CG30 244 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 BMP4P12644 408 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PKMP14618 531 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ARSAP15289 507 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 IL7RP16871 459 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF24P17028 368 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 POLR2EP19388 210 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TYMPP19971 482 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PCMT1P22061 227 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 BDNFP23560 247 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PSMA3P25788 255 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 MAPK1P28482 360 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 FMO4P31512 558 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 DCTP40126 519 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ARL1P40616 181 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZFP36L2P47974 494 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PPP3CCP48454 512 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PIK3CGP48736 1102 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 CLK1P49759 484 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 RGS4P49798 205 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ARSDP51689 593 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 CLCN4P51793 760 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 NEK2P51955 445 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 KPNA1P52294 538 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 MAPK10P53779 464 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 EPHA4P54764 986 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 GP2P55259 537 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TBX4P57082 545 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ISL1P61371 349 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 OLR1P78380 273 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 FOXK2Q01167 660 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 DSC2Q02487 901 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TMEM62Q0P6H9 643 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ELP6Q0PNE2 266 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ABRQ12979 859 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 CDK5R2Q13319 367 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 AQP6Q13520 282 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 SERINC3Q13530 473 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 SELPLGQ14242 412 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TAF1AQ15573 450 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TSNQ15631 228 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 NPTX1Q15818 432 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PHKG1Q16816 387 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 MEP1AQ16819 746 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 AP5B1Q2VPB7 878 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 FBXO43Q4G163 708 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PAGE2BQ5JRK9 111 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 THOC7Q6I9Y2 204 aaKnown RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 CAPN13Q6MZZ7 669 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ERICH5Q6P6B1 374 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC2A7Q6PXP3 512 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TBPL2Q6SJ96 375 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 PAQR3Q6TCH7 311 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 IL27RAQ6UWB1 636 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 DLEU7Q6UYE1 221 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 USP43Q70EL4 1123 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 CHST15Q7LFX5 561 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 MON1AQ86VX9 555 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TSPYL5Q86VY4 417 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 RALGPS2Q86X27 583 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF295-AS1Q8N0V1 137 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 CADM3Q8N126 398 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 GPC2Q8N158 579 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 SIX5Q8N196 739 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 TMEM132CQ8N3T6 1108 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 KIAA1958Q8N8K9 716 aa4.87□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF548Q8NEK5 533 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms