RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CCDC89Q8N998 374 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 OR4L1Q8NH43 312 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 LCN9Q8WX39 176 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 LRRC45Q96CN5 670 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 CD180Q99467 661 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 ARHGAP9Q9BRR9 750 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 TWSG1Q9GZX9 223 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 SRMSQ9H3Y6 488 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 LHX9Q9NQ69 397 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 SYBUQ9NX95 663 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 RARRES3Q9UL19 164 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 COLEC10Q9Y6Z7 277 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 BOD1L1Q8NFC6 3051 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 GSAPA4D1B5 854 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 KRT87PA6NCN2 255 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 K7EM74 188 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 MGAT1P26572 445 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 CD151P48509 253 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 HSD11B2P80365 405 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 BASP1P80723 227 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 RPA4Q13156 261 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 GRB7Q14451 532 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 KRT33BQ14525 404 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 DEFB109BQ30KR1 87 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 KLHL35Q6PF15 583 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 TMEM151BQ8IW70 566 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 REXO1L1PQ8IX06 675 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 FAM20CQ8IXL6 584 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 OR6P1Q8NGX9 317 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 OR1L3Q8NH93 324 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 STAMBPL1Q96FJ0 436 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 TRAPPC9Q96Q05 1148 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 ALS2CR12Q96Q35 445 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 MENTQ9BUN1 341 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 PITPNM3Q9BZ71 974 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 KCNF1Q9H3M0 494 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 TFB2MQ9H5Q4 396 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 FAM60AQ9NP50 221 aa16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 EIF2B3Q9NR50 452 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-215ENST00000506161 GOLGA8KD6RF30 607 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 GOLGA8TH3BQL2 631 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 IFRD1O00458 451 aaPredicted RBP16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 LIN7AO14910 233 aaPredicted RBP16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 AVILO75366 819 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 TMEM63AO94886 807 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 ZBTB11O95625 1053 aaPredicted RBP16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 NR1D1P20393 614 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 CDH3P22223 829 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 GABRA4P48169 554 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 VPS41P49754 854 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 DNASE1L3Q13609 305 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 ERV3-1Q14264 604 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 KCNJ11Q14654 390 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 PCID2Q5JVF3 399 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 BORAQ6PGQ7 559 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 UNC5AQ6ZN44 842 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 AMIGO1Q86WK6 493 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 KMT5CQ86Y97 462 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 AGGF1Q8N302 714 aaeCLIP16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 TRIM58Q8NG06 486 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 KIAA1143Q96AT1 154 aaPredicted RBP16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 MFSD3Q96ES6 412 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 AP1M1Q9BXS5 423 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 TRIT1Q9H3H1 467 aaKnown RBP16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 MVB12BQ9H7P6 319 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 PDE7BQ9NP56 450 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 GEMIN8Q9NWZ8 242 aaKnown RBP16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 SOHLH2Q9NX45 425 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 ACTR10Q9NZ32 417 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 IL1RAPL1Q9NZN1 696 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 HEBP2Q9Y5Z4 205 aa16.21■□□□□ 0.19
PDLIM7-215ENST00000506161 SUV39H1O43463 412 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 KATNA1O75449 491 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 GP1BBP13224 206 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 UGT2B7P16662 529 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 TCN2P20062 427 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 TUBB4BP68371 445 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 ACY1Q03154 408 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 TUBB2AQ13885 445 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 DEFB110Q30KQ9 67 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 CTSL3PQ5NE16 218 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 CDHR3Q6ZTQ4 885 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 PTRH1Q86Y79 214 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 RASGEF1CQ8N431 466 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 PPHLN1Q8NEY8 458 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 COG1Q8WTW3 980 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 SGSM3Q96HU1 749 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 IL17FQ96PD4 163 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 OR2A14Q96R47 310 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 TUBB2BQ9BVA1 445 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 P2RY12Q9H244 342 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 C1GALT1Q9NS00 363 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 RUVBL2Q9Y230 463 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 ASF1AQ9Y294 204 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 TDRKHQ9Y2W6 561 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 NEU2Q9Y3R4 380 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 SEC16AO15027 2179 aa16.2■□□□□ 0.18
PDLIM7-215ENST00000506161 PCM1Q15154 2024 aa16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 TLN1Q9Y490 2541 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-215ENST00000506161 H3BMH7 237 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms