RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 KATNA1O75449 491 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 DNAJB5O75953 348 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 ST6GAL1P15907 406 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 TCN2P20062 427 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 HADHAP40939 763 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 PRKG2Q13237 762 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 IL10RAQ13651 578 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 BOP1Q14137 746 aaKnown RBP12.75□□□□□ -0.37
DDX41-204ENST00000504807 BRD3Q15059 726 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 ASB18Q6ZVZ8 466 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 TAS2R42Q7RTR8 314 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 OOSP2Q86WS3 158 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 SLC13A5Q86YT5 568 aaPredicted RBP12.75□□□□□ -0.37
DDX41-204ENST00000504807 ADGRF3Q8IZF5 1079 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 OR5AR1Q8NGP9 310 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 FLVCR1-AS1Q8TAF5 88 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 PRR7Q8TB68 274 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 ULK4Q96C45 1275 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 STAMBPL1Q96FJ0 436 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 FERD3LQ96RJ6 166 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 PCNX1Q96RV3 2341 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 C19orf43Q9BQ61 176 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 CCM2Q9BSQ5 444 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 HGH1Q9BTY7 390 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 TRIM55Q9BYV6 548 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 TWSG1Q9GZX9 223 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 TRIT1Q9H3H1 467 aaKnown RBP12.75□□□□□ -0.37
DDX41-204ENST00000504807 RARRES3Q9UL19 164 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 ICKQ9UPZ9 632 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 C17orf113A0A1B0GUU1 675 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 UBA6A0AVT1 1052 aaPredicted RBP12.74□□□□□ -0.37
DDX41-204ENST00000504807 SUN1O94901 812 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 CAPN1P07384 714 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 MSNP26038 577 aaKnown RBP12.74□□□□□ -0.37
DDX41-204ENST00000504807 ACADLP28330 430 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 LMAN1P49257 510 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 HSD11B2P80365 405 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 PDE1BQ01064 536 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 CACNG1Q06432 222 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 MRPL49Q13405 166 aaKnown RBP12.74□□□□□ -0.37
DDX41-204ENST00000504807 DNASE1L3Q13609 305 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 GSE1Q14687 1217 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 NAA30Q147X3 362 aaPredicted RBP12.74□□□□□ -0.37
DDX41-204ENST00000504807 ZIC1Q15915 447 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 GPR33Q49SQ1 333 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 CPZQ66K79 652 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 ZNF517Q6ZMY9 492 aaPredicted RBP12.74□□□□□ -0.37
DDX41-204ENST00000504807 LDB1Q86U70 411 aaPredicted RBP12.74□□□□□ -0.37
DDX41-204ENST00000504807 TRIM73Q86UV7 250 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 VRK3Q8IV63 474 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 SYCE1Q8N0S2 351 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 TTC13Q8NBP0 860 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 ACVR1CQ8NER5 493 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 OR1L3Q8NH93 324 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 STYXQ8WUJ0 223 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 TCTN2Q96GX1 697 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 PITPNM3Q9BZ71 974 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 ACTL8Q9H568 366 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 FAM60AQ9NP50 221 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 SPHK1Q9NYA1 384 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 SMARCAL1Q9NZC9 954 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 MARCH4Q9P2E8 410 aaPredicted RBP12.74□□□□□ -0.37
DDX41-204ENST00000504807 IMPACTQ9P2X3 320 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 FEZ2Q9UHY8 353 aaPredicted RBP12.74□□□□□ -0.37
DDX41-204ENST00000504807 PLAGL1Q9UM63 463 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 GUCA1BQ9UMX6 200 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 BTRCQ9Y297 605 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 PCDHGA6Q9Y5G7 932 aa12.74□□□□□ -0.37
DDX41-204ENST00000504807 SLC5A10A0PJK1 596 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 CDC14CA4D256 554 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 IQCF5A8MTL0 148 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 H3BMH7 237 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 CREG1O75629 220 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 SCRG1O75711 98 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 ZBTB11O95625 1053 aaPredicted RBP12.73□□□□□ -0.37
DDX41-204ENST00000504807 GOT2P00505 430 aaKnown RBP12.73□□□□□ -0.37
DDX41-204ENST00000504807 PRDX3P30048 256 aaKnown RBP12.73□□□□□ -0.37
DDX41-204ENST00000504807 PEBP1P30086 187 aaKnown RBP12.73□□□□□ -0.37
DDX41-204ENST00000504807 CETN2P41208 172 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 GABRA4P48169 554 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 FOXL2P58012 376 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 TUBB4BP68371 445 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 CRADDP78560 199 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 ACVR1Q04771 509 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 TUBB2AQ13885 445 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 P3H1Q32P28 736 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 CRTC2Q53ET0 693 aaPredicted RBP12.73□□□□□ -0.37
DDX41-204ENST00000504807 PLEKHS1Q5SXH7 462 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 MEI1Q5TIA1 1274 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 KMT5CQ86Y97 462 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 FAM20CQ8IXL6 584 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 ZFPM2Q8WW38 1151 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 LCN9Q8WX39 176 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 HDAC10Q969S8 669 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 TRAPPC9Q96Q05 1148 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 CD180Q99467 661 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 FERMT1Q9BQL6 677 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 TUBB2BQ9BVA1 445 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 SRMSQ9H3Y6 488 aa12.73□□□□□ -0.37
DDX41-204ENST00000504807 PDE7BQ9NP56 450 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms