RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 CCDC106Q9BWC9 280 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 NUF2Q9BZD4 464 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 NYXQ9GZU5 481 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 C2orf40Q9H1Z8 148 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 DPH5Q9H2P9 285 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 AZI2Q9H6S1 392 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 LRRC19Q9H756 370 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 C17orf75Q9HAS0 396 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 TM9SF3Q9HD45 589 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 UBN1Q9NPG3 1134 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 KLHL1Q9NR64 748 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 SDHAF3Q9NRP4 125 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 MRGBPQ9NV56 204 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 DACT1Q9NYF0 836 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 EHD2Q9NZN4 543 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 C1RLQ9NZP8 487 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 COX16Q9P0S2 106 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ATXN10Q9UBB4 475 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 NFKBIL1Q9UBC1 381 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 GIMAP2Q9UG22 337 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PRO0461Q9UI25 63 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CD207Q9UJ71 328 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ANAPC5Q9UJX4 755 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CORO1CQ9ULV4 474 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CHMP2BQ9UQN3 213 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 TIMM22Q9Y584 194 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PSAT1Q9Y617 370 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 TRIOBPQ9H2D6 2365 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 NACADO15069 1562 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 BAZ1AQ9NRL2 1556 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 NSD2O96028 1365 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 MTUS2Q5JR59 1369 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 FRMPD4Q14CM0 1322 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 POLA1P09884 1462 aaPredicted RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 BAZ1BQ9UIG0 1483 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TRAV6A0A075B6T7 132 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ABHD14A-ACY1A0A1B0GW23 586 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 hCG_1642624A0A1W2PR95 340 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 MACROD2A1Z1Q3 448 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 MAGEB16A2A368 324 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 HTR3EA5X5Y0 456 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SYNDIG1LA6NDD5 238 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ACOD1A6NK06 481 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SPECC1L-ADORA2AF8WAN1 911 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CASC3O15234 703 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TXNL1O43396 289 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 NBNO60934 754 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 NIPSNAP2O75323 286 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TACC1O75410 805 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CRLF1O75462 422 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 GFPT2O94808 682 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CAVIN2O95810 425 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 NPPAP01160 153 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 KRT14P02533 472 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 HMGN1P05114 100 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TUBBP07437 444 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 RPS17P08708 135 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 POLR2MP0CAP2 368 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 PNMA6AP0CW24 399 aaPredicted RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SCG2P13521 617 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 EZRP15311 586 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 VEGFAP15692 232 aaPredicted RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TMEM11P17152 192 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CTRB1P17538 263 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 PTPN2P17706 415 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SRD5A1P18405 259 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CD72P21854 359 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 PRKACBP22694 351 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CFL1P23528 166 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ACAT1P24752 427 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ANXA13P27216 316 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CST5P28325 142 aaPredicted RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 PBLDP30039 288 aaPredicted RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 RYKP34925 604 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 LONP1P36776 959 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 GRK6P43250 576 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 RGS7P49802 495 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 THOP1P52888 689 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 AP3M2P53677 418 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 DRG2P55039 364 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 HADHBP55084 474 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 GSDMDP57764 484 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 SEC61BP60468 96 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 YWHAZP63104 245 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 TUBB4BP68371 445 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 NOP14P78316 857 aaKnown RBP1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 MPP1Q00013 466 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 IL1RL1Q01638 556 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ACY1Q03154 408 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 GBE1Q04446 702 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 IFFO1Q0D2I5 559 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 PPFIA1Q13136 1202 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CBX3Q13185 183 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 DNAJC3Q13217 504 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ITGADQ13349 1161 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 CUL1Q13616 776 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 ITGA7Q13683 1181 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 GNA13Q14344 377 aa1.97□□□□□ -2.09
HMGB3P17-201ENST00000504195 DPYSL2Q16555 572 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms