RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 PADI2Q9Y2J8 665 aa4.67□□□□□ -1.66
SCLT1-206ENST00000503565 ATP10AO60312 1499 aa4.67□□□□□ -1.66
SCLT1-206ENST00000503565 CCDC141Q6ZP82 1450 aa4.67□□□□□ -1.66
SCLT1-206ENST00000503565 MBD5Q9P267 1494 aa4.67□□□□□ -1.66
SCLT1-206ENST00000503565 MLH3Q9UHC1 1453 aa4.67□□□□□ -1.66
SCLT1-206ENST00000503565 KDM5CP41229 1560 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 PRSS51A0A1B0GVH4 220 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 MEIS2O14770 477 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 EIF3DO15371 548 aaKnown RBP eCLIP4.66□□□□□ -1.66
SCLT1-206ENST00000503565 AP5Z1O43299 807 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 TSPAN1O60635 241 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 NME6O75414 186 aaPredicted RBP4.66□□□□□ -1.66
SCLT1-206ENST00000503565 LCATP04180 440 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 INHBAP08476 426 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 NAGAP17050 411 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 LBPP18428 481 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 LMO1P25800 156 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 CALRP27797 417 aaKnown RBP4.66□□□□□ -1.66
SCLT1-206ENST00000503565 RPL3P39023 403 aaKnown RBP4.66□□□□□ -1.66
SCLT1-206ENST00000503565 STX1BP61266 288 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 IL1RL1Q01638 556 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 CBX3Q13185 183 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 CTF1Q16619 201 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 UGCGQ16739 394 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 TWISTNBQ3B726 338 aaPredicted RBP4.66□□□□□ -1.66
SCLT1-206ENST00000503565 Q4G0T1 1027 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 C10orf25Q5T742 122 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 FAM109BQ6ICB4 259 aaPredicted RBP4.66□□□□□ -1.66
SCLT1-206ENST00000503565 PRR27Q6MZM9 219 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 SLC18B1Q6NT16 456 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 Q75L30 129 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 KCTD9Q7L273 389 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 PTF1AQ7RTS3 328 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 YTHDF3Q7Z739 585 aaKnown RBP4.66□□□□□ -1.66
SCLT1-206ENST00000503565 C7orf57Q8NEG2 295 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 WFIKKN2Q8TEU8 576 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 OIT3Q8WWZ8 545 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 HNRNPABQ99729 332 aaKnown RBP4.66□□□□□ -1.66
SCLT1-206ENST00000503565 XPO4Q9C0E2 1151 aaKnown RBP4.66□□□□□ -1.66
SCLT1-206ENST00000503565 PRSS22Q9GZN4 317 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 SEMA6AQ9H2E6 1030 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 CATSPERBQ9H7T0 1116 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 MINDY3Q9H8M7 445 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 HHATLQ9HCP6 504 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 KRCC1Q9NPI7 259 aaPredicted RBP4.66□□□□□ -1.66
SCLT1-206ENST00000503565 DPP3Q9NY33 737 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 PTGFRNQ9P2B2 879 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 ABT1Q9ULW3 272 aaKnown RBP4.66□□□□□ -1.66
SCLT1-206ENST00000503565 PAM16Q9Y3D7 125 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 TCOF1Q13428 1488 aaKnown RBP4.66□□□□□ -1.66
SCLT1-206ENST00000503565 ATP7AQ04656 1500 aa4.66□□□□□ -1.66
SCLT1-206ENST00000503565 ARHGEF5Q12774 1597 aa4.65□□□□□ -1.66
SCLT1-206ENST00000503565 RTEL1-TNFRSF6BF6WH68 1400 aa4.65□□□□□ -1.66
SCLT1-206ENST00000503565 PTPRTO14522 1441 aa4.65□□□□□ -1.66
SCLT1-206ENST00000503565 DAPK1P53355 1430 aa4.65□□□□□ -1.66
SCLT1-206ENST00000503565 C9orf84Q5VXU9 1444 aa4.65□□□□□ -1.66
SCLT1-206ENST00000503565 IGHV4-28A0A0C4DH34 117 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 YDJCA8MPS7 323 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 H0YGN5 161 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 ASAP2O43150 1006 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 RBMXL2O75526 392 aaKnown RBP4.65□□□□□ -1.67
SCLT1-206ENST00000503565 WISP2O76076 250 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 MOCS3O95396 460 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 RLN1P04808 185 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 PLA2G4BP0C869 781 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 UROSP10746 265 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 P4HA1P13674 534 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 ACAT1P24752 427 aaKnown RBP4.65□□□□□ -1.67
SCLT1-206ENST00000503565 KHKP50053 298 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 MXI1P50539 228 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 ASCL1P50553 236 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 CTSCP53634 463 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 HSPA2P54652 639 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 SLC12A3P55017 1021 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 ELLP55199 621 aaPredicted RBP4.65□□□□□ -1.67
SCLT1-206ENST00000503565 NME5P56597 212 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 SEC61BP60468 96 aaKnown RBP4.65□□□□□ -1.67
SCLT1-206ENST00000503565 ST8SIA6P61647 398 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 PNRC1Q12796 327 aaPredicted RBP4.65□□□□□ -1.67
SCLT1-206ENST00000503565 CDO1Q16878 200 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 KBTBD12Q3ZCT8 623 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 AMZ1Q400G9 498 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 FAM69BQ5VUD6 431 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 WDR73Q6P4I2 378 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 ZNF517Q6ZMY9 492 aaPredicted RBP4.65□□□□□ -1.67
SCLT1-206ENST00000503565 TMPRSS11FQ6ZWK6 438 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 DGLUCYQ7Z3D6 616 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 DZIP1Q86YF9 867 aaKnown RBP4.65□□□□□ -1.67
SCLT1-206ENST00000503565 RAD54LQ92698 747 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 SLC25A28Q96A46 364 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 COQ8BQ96D53 544 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 BSCL2Q96G97 398 aaPredicted RBP4.65□□□□□ -1.67
SCLT1-206ENST00000503565 NLRP4Q96MN2 994 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 SFXN2Q96NB2 322 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 SEZ6LQ9BYH1 1024 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 FOXP1Q9H334 677 aaPredicted RBP4.65□□□□□ -1.67
SCLT1-206ENST00000503565 FN3KQ9H479 309 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 Q9N2K0 584 aa4.65□□□□□ -1.67
SCLT1-206ENST00000503565 DNAJC17Q9NVM6 304 aaKnown RBP4.65□□□□□ -1.67
SCLT1-206ENST00000503565 NPAP1Q9NZP6 1156 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms