RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 VPS37BQ9H9H4 285 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 PDE7BQ9NP56 450 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 SPHK1Q9NYA1 384 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 ACTR10Q9NZ32 417 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 IL1RAPL1Q9NZN1 696 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 TSR3Q9UJK0 312 aaKnown RBP10.3□□□□□ -0.76
NELFE-213ENST00000494956 ASF1AQ9Y294 204 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 TDRKHQ9Y2W6 561 aaKnown RBP10.3□□□□□ -0.76
NELFE-213ENST00000494956 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 HEBP2Q9Y5Z4 205 aa10.3□□□□□ -0.76
NELFE-213ENST00000494956 FER1L5A0AVI2 2057 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 B8ZZF3 427 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 LIN7AO14910 233 aaPredicted RBP10.29□□□□□ -0.76
NELFE-213ENST00000494956 HCRTR1O43613 425 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 ZBTB11O95625 1053 aaPredicted RBP10.29□□□□□ -0.76
NELFE-213ENST00000494956 FTH1P02794 183 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 CTSBP07858 339 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 OR56A5P0C7T3 313 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 TCN2P20062 427 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 NR1D1P20393 614 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 ARNTP27540 789 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 CD151P48509 253 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 POLE2P56282 527 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 ACY1Q03154 408 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 HSPA14Q0VDF9 509 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 PRKAA1Q13131 559 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 RPA4Q13156 261 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 GPS2Q13227 327 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 MAP7Q14244 749 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 DEFB110Q30KQ9 67 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 UNC5AQ6ZN44 842 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 AMIGO1Q86WK6 493 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 PTRH1Q86Y79 214 aaKnown RBP10.29□□□□□ -0.76
NELFE-213ENST00000494956 TMEM126BQ8IUX1 230 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 SLC35F6Q8N357 371 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 C2orf73Q8N5S3 287 aaPredicted RBP10.29□□□□□ -0.76
NELFE-213ENST00000494956 OR1L3Q8NH93 324 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 CFAP61Q8NHU2 1237 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 COG1Q8WTW3 980 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.29□□□□□ -0.76
NELFE-213ENST00000494956 CD180Q99467 661 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 TRIM4Q9C037 500 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 TRIT1Q9H3H1 467 aaKnown RBP10.29□□□□□ -0.76
NELFE-213ENST00000494956 KCNF1Q9H3M0 494 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 TFB2MQ9H5Q4 396 aaKnown RBP10.29□□□□□ -0.76
NELFE-213ENST00000494956 MVB12BQ9H7P6 319 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 GRPEL1Q9HAV7 217 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 FAM60AQ9NP50 221 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 LHX9Q9NQ69 397 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 EIF2B3Q9NR50 452 aaKnown RBP10.29□□□□□ -0.76
NELFE-213ENST00000494956 TREX1Q9NSU2 369 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 CATSPERZQ9NTU4 200 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 TRMT1Q9NXH9 659 aaKnown RBP10.29□□□□□ -0.76
NELFE-213ENST00000494956 RIMKLBQ9ULI2 386 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 RUVBL2Q9Y230 463 aaKnown RBP10.29□□□□□ -0.76
NELFE-213ENST00000494956 CDYLQ9Y232 598 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 BTRCQ9Y297 605 aa10.29□□□□□ -0.76
NELFE-213ENST00000494956 CFAP46Q8IYW2 2715 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 TNRC6AQ8NDV7 1962 aaKnown RBP10.28□□□□□ -0.76
NELFE-213ENST00000494956 CDC14CA4D256 554 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 GOLGA6L3A6NEY3 463 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 TMEM150CB9EJG8 249 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 GOLGA8MH3BSY2 632 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 K7EM74 188 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 ZNF185O15231 689 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 CD3EAPO15446 510 aaKnown RBP10.28□□□□□ -0.76
NELFE-213ENST00000494956 SCRG1O75711 98 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 TMEM63AO94886 807 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 KRT14P02533 472 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 UGT2B7P16662 529 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 PEBP1P30086 187 aaKnown RBP10.28□□□□□ -0.76
NELFE-213ENST00000494956 TUBB4BP68371 445 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 GPS1Q13098 491 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 DNASE1L3Q13609 305 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 TUBB2AQ13885 445 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 KCNJ11Q14654 390 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 ZIC1Q15915 447 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 SYTL3Q4VX76 610 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 ZNF449Q6P9G9 518 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 BORAQ6PGQ7 559 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 CDHR3Q6ZTQ4 885 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 PRICKLE2Q7Z3G6 844 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 TAX1BP1Q86VP1 789 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 KMT5CQ86Y97 462 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 RASGEF1CQ8N431 466 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 OTUD6BQ8N6M0 293 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 FLVCR1-AS1Q8TAF5 88 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 FAM136AQ96C01 138 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 IL17FQ96PD4 163 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 TRAPPC9Q96Q05 1148 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 OR2A14Q96R47 310 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 TUBB2BQ9BVA1 445 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 ZNF71Q9NQZ8 489 aaPredicted RBP10.28□□□□□ -0.76
NELFE-213ENST00000494956 C1GALT1Q9NS00 363 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 KCND1Q9NSA2 647 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 STARD5Q9NSY2 213 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 BFARQ9NZS9 450 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 PADI1Q9ULC6 663 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 ZKSCAN5Q9Y2L8 839 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 KLHL20Q9Y2M5 609 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms