RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 IL17CQ9P0M4 197 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 EIF2B4Q9UI10 523 aaKnown RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 FKBPLQ9UIM3 349 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 LRFN2Q9ULH4 789 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 SNX6Q9UNH7 406 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 PRG3Q9Y2Y8 225 aaPredicted RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 RWDD3Q9Y3V2 267 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 PCDHGB1Q9Y5G3 927 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 KIAA1671Q9BY89 1806 aa11.27□□□□□ -0.6
RFC4-214ENST00000494047 A0A096LPI6 279 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 TRBV5-4A0A0C4DH59 114 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 ASPDHA6ND91 283 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 GNGT2O14610 69 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 SLC16A5O15375 505 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 FZD6O60353 706 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 TPST1O60507 370 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 UGDHO60701 494 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 UGT2B11O75310 529 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 BCL10O95999 233 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 PRLP01236 227 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 NTRK1P04629 796 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 C8GP07360 202 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 ANXA5P08758 320 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 ITIH1P19827 911 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 PPIBP23284 216 aaKnown RBP11.27□□□□□ -0.61
RFC4-214ENST00000494047 EEF1B2P24534 225 aaKnown RBP11.27□□□□□ -0.61
RFC4-214ENST00000494047 HRH2P25021 359 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 PCSK6P29122 969 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 CASP2P42575 452 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 RANBP1P43487 201 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 PGFP49763 221 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 EMP3P54852 163 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 ERVK-21P61565 698 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 RHOAP61586 193 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 OCA2Q04671 838 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 ABHD18Q0P651 414 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 KCNC3Q14003 757 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 ACOX1Q15067 660 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 LRIF1Q5T3J3 769 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 Q6ZSR9 355 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 TAS2R42Q7RTR8 314 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 GPR149Q86SP6 731 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 ZNF280BQ86YH2 543 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 EGFL6Q8IUX8 553 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 CPNE9Q8IYJ1 553 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 SVOPQ8N4V2 548 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 SIDT2Q8NBJ9 832 aaKnown RBP11.27□□□□□ -0.61
RFC4-214ENST00000494047 ATAD1Q8NBU5 361 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 PIK3C3Q8NEB9 887 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 ZNF548Q8NEK5 533 aaPredicted RBP11.27□□□□□ -0.61
RFC4-214ENST00000494047 EEF1AKMT1Q8WVE0 214 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 FAM162AQ96A26 154 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 TESCQ96BS2 214 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 SLC47A1Q96FL8 570 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 ITCHQ96J02 903 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 ZNF512Q96ME7 567 aaPredicted RBP11.27□□□□□ -0.61
RFC4-214ENST00000494047 NSMCE3Q96MG7 304 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 LYSMD1Q96S90 227 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 CD244Q9BZW8 370 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 CLMPQ9H6B4 373 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 IPPKQ9H8X2 491 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 C1orf109Q9NX04 203 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 KCTD5Q9NXV2 234 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 WWOXQ9NZC7 414 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.27□□□□□ -0.61
RFC4-214ENST00000494047 AFF4Q9UHB7 1163 aaKnown RBP11.27□□□□□ -0.61
RFC4-214ENST00000494047 RPS6KA6Q9UK32 745 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 PSME2Q9UL46 239 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 PCDHGB4Q9UN71 923 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 TIMM22Q9Y584 194 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 PCDHGB5Q9Y5G0 923 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 PCDHGA11Q9Y5H2 935 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 SPO11Q9Y5K1 396 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 ZFC3H1O60293 1989 aaKnown RBP11.27□□□□□ -0.61
RFC4-214ENST00000494047 SCN8AQ9UQD0 1980 aa11.27□□□□□ -0.61
RFC4-214ENST00000494047 CDH23Q9H251 3354 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 CBX4O00257 560 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 CCL22O00626 93 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 WNT9AO14904 365 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 ANKRD28O15084 1053 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 SLC22A1O15245 554 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 SLC16A6O15403 523 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 NIPSNAP2O75323 286 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 CCNDBP1O95273 360 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 PGLSO95336 258 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 CST1P01037 141 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 F11P03951 625 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 HMBSP08397 361 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 IMPDH2P12268 514 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 PFKLP17858 780 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 PTX3P26022 381 aaPredicted RBP11.26□□□□□ -0.61
RFC4-214ENST00000494047 NSG1P42857 185 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 MTHFRP42898 656 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 PNLIPRP1P54315 467 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 C21orf59P57076 290 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 ERVPABLB-1P60509 514 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 TWF1Q12792 350 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 TRAF3Q13114 568 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 PLD1Q13393 1074 aa11.26□□□□□ -0.61
RFC4-214ENST00000494047 KEAP1Q14145 624 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms