RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 RNF38Q9H0F5 515 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 ACTL8Q9H568 366 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 SLC52A3Q9NQ40 469 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 AIG1Q9NVV5 245 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 DNMT3BQ9UBC3 853 aaKnown RBP13.56□□□□□ -0.24
TFE3-204ENST00000493583 MED16Q9Y2X0 877 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 SIP14410 1827 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 H0YJX3 145 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 NTRK1P04629 796 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 ENO2P09104 434 aaPredicted RBP13.56□□□□□ -0.24
TFE3-204ENST00000493583 RPL17P18621 184 aaKnown RBP13.56□□□□□ -0.24
TFE3-204ENST00000493583 CLK1P49759 484 aaKnown RBP13.56□□□□□ -0.24
TFE3-204ENST00000493583 CAP1Q01518 475 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 CTF1Q16619 201 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 PPP2R2DQ66LE6 453 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 CES5AQ6NT32 575 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 DLEU7Q6UYE1 221 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 CYP4Z1Q86W10 505 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 HID1Q8IV36 788 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 CCDC103Q8IW40 242 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 STON2Q8WXE9 905 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 NECTIN4Q96NY8 510 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 MAGEE1Q9HCI5 957 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 TFECO14948 347 aaPredicted RBP13.56□□□□□ -0.24
TFE3-204ENST00000493583 MFN2O95140 757 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 GLUD1P00367 558 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 ATXN1LP0C7T5 689 aaKnown RBP13.56□□□□□ -0.24
TFE3-204ENST00000493583 RAD51Q06609 339 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 ZNF420Q8TAQ5 688 aaPredicted RBP13.56□□□□□ -0.24
TFE3-204ENST00000493583 BOCQ9BWV1 1114 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 EBPLQ9BY08 206 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 REXO4Q9GZR2 422 aaKnown RBP13.56□□□□□ -0.24
TFE3-204ENST00000493583 TAS2R13Q9NYV9 303 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 PTBP2Q9UKA9 531 aaKnown RBP13.56□□□□□ -0.24
TFE3-204ENST00000493583 ABCG2Q9UNQ0 655 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 ANGPTL3Q9Y5C1 460 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 PCDHB14Q9Y5E9 798 aa13.56□□□□□ -0.24
TFE3-204ENST00000493583 PNMA8CA0A1B0GUJ8 204 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 BCKDKO14874 412 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 COL6A1P12109 1028 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 FDXRP22570 491 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 SLC14A1Q13336 389 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 MAPKAPK3Q16644 382 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 DEPDC1Q5TB30 811 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 FKBP10Q96AY3 582 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 AP3D1O14617 1153 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 PFDN6O15212 129 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 RAMP2O60895 175 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 PEX11BO96011 259 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 ALDH2P05091 517 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 ALPIP09923 528 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 CA5AP35218 305 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 ATN1P54259 1190 aaPredicted RBP13.55□□□□□ -0.24
TFE3-204ENST00000493583 TBX4P57082 545 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 SELENBP1Q13228 472 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 CRY1Q16526 586 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 MS4A13Q5J8X5 152 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 LIX1Q8N485 282 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 MDGA1Q8NFP4 955 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.55□□□□□ -0.24
TFE3-204ENST00000493583 L3HYPDHQ96EM0 354 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 PRKD2Q9BZL6 878 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 TM6SF2Q9BZW4 377 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 IPPKQ9H8X2 491 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 CD320Q9NPF0 282 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 DDX28Q9NUL7 540 aaKnown RBP13.55□□□□□ -0.24
TFE3-204ENST00000493583 GNPTGQ9UJJ9 305 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 WDR90Q96KV7 1748 aa13.55□□□□□ -0.24
TFE3-204ENST00000493583 MC4RP32245 332 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 COPZ1P61923 177 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 HTRA3P83110 453 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 AASDHQ4L235 1098 aaPredicted RBP13.54□□□□□ -0.24
TFE3-204ENST00000493583 RUNDC3AQ59EK9 446 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 CARD16Q5EG05 197 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 DEPDC4Q8N2C3 294 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 CELF2-AS1Q8N7Q2 184 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 LMNTD1Q8N9Z9 388 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 ATG16L2Q8NAA4 619 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 ARRDC2Q8TBH0 407 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 AARSD1Q9BTE6 412 aaKnown RBP13.54□□□□□ -0.24
TFE3-204ENST00000493583 KATNAL1Q9BW62 490 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 TRIM54Q9BYV2 358 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 HMG20AQ9NP66 347 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 COMMD8Q9NX08 183 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 IL37Q9NZH6 218 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 TRMT6Q9UJA5 497 aaKnown RBP13.54□□□□□ -0.24
TFE3-204ENST00000493583 PCTPQ9UKL6 214 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 KIAA0100Q14667 2235 aaKnown RBP13.54□□□□□ -0.24
TFE3-204ENST00000493583 BBIP1A8MTZ0 92 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 ZNF99A8MXY4 864 aaPredicted RBP13.54□□□□□ -0.24
TFE3-204ENST00000493583 FAM20BO75063 409 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 GUCY1B2O75343 617 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 OPN1SWP03999 348 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 RAP2AP10114 183 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 FCGR1AP12314 374 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 SCNN1AP37088 669 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 HCAR3P49019 387 aa13.54□□□□□ -0.24
TFE3-204ENST00000493583 MLLT6P55198 1093 aaPredicted RBP13.54□□□□□ -0.24
TFE3-204ENST00000493583 TSTA3Q13630 321 aaPredicted RBP13.54□□□□□ -0.24
TFE3-204ENST00000493583 PRSS36Q5K4E3 855 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms