RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 NMBRP28336 390 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 SHMT2P34897 504 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 DLSTP36957 453 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 GPS1Q13098 491 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 ARMC3Q5W041 872 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 FBXO38Q6PIJ6 1188 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 NAPRTQ6XQN6 538 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 REXO1L1PQ8IX06 675 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 ADGRF3Q8IZF5 1079 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 OR5K2Q8NHB8 316 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 ASZ1Q8WWH4 475 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 RNF31Q96EP0 1072 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 MS4A14Q96JA4 679 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 XKR8Q9H6D3 395 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 FANCEQ9HB96 536 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 SYTL2Q9HCH5 934 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 KCND3Q9UK17 655 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 CROTQ9UKG9 612 aa26.3■■□□□ 1.8
SH3GL3-204ENST00000492099 COL6A6A6NMZ7 2263 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 KRT14P02533 472 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 FAM87AP0C7U9 286 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 TCN2P20062 427 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 CCR7P32248 378 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 MAGEA6P43360 314 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 CDC20Q12834 499 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 DNAJC21Q5F1R6 531 aaKnown RBP26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 TTC27Q6P3X3 843 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 LDB1Q86U70 411 aaPredicted RBP26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 ZNF501Q96CX3 271 aaPredicted RBP26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 AP1M1Q9BXS5 423 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 PITPNM3Q9BZ71 974 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 LHX9Q9NQ69 397 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 LATS2Q9NRM7 1088 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 SYBUQ9NX95 663 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 ACTR10Q9NZ32 417 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 MARCH4Q9P2E8 410 aaPredicted RBP26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 ICKQ9UPZ9 632 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 PCDHB3Q9Y5E6 796 aa26.29■■□□□ 1.8
SH3GL3-204ENST00000492099 CFAP46Q8IYW2 2715 aa26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 TCRBV7S3A2A0A539 114 aa26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 PGRMC1O00264 195 aaKnown RBP26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 ITGB6P18564 788 aa26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 F8A1P23610 371 aa26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 VPS41P49754 854 aa26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 HSPA14Q0VDF9 509 aa26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 KCNJ11Q14654 390 aa26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 GPR19Q15760 415 aa26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 CYP1B1Q16678 543 aa26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 LRRC6Q86X45 466 aa26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 SLC22A15Q8IZD6 547 aa26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 OR6C2Q9NZP2 312 aa26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 SOX13Q9UN79 622 aa26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 TDRKHQ9Y2W6 561 aaKnown RBP26.28■■□□□ 1.8
SH3GL3-204ENST00000492099 PIPSLA2A3N6 862 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 B8ZZF3 427 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 TERTO14746 1132 aaKnown RBP26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 GPC4O75487 556 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 NDUFS3O75489 264 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 NTRK1P04629 796 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 APOA4P06727 396 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 MSL3P1P0C860 447 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 PRKAR1AP10644 381 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 COILP38432 576 aaPredicted RBP26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 CSE1LP55060 971 aaKnown RBP26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 PTRHD1Q6GMV3 140 aaKnown RBP26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 UNC5AQ6ZN44 842 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 HOOK3Q86VS8 718 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 TMEM126BQ8IUX1 230 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 SLC35F6Q8N357 371 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 MFSD3Q96ES6 412 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 PANX3Q96QZ0 392 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 NRTNQ99748 197 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 ADNPQ9H2P0 1102 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 GEMIN8Q9NWZ8 242 aaKnown RBP26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 GNPTGQ9UJJ9 305 aa26.27■■□□□ 1.8
SH3GL3-204ENST00000492099 BAHCC1Q9P281 2608 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 IQCF5A8MTL0 148 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 C21orf140B9A014 251 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 CPNE3O75131 537 aaKnown RBP26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 SCRG1O75711 98 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 VAPBO95292 243 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 ST6GAL1P15907 406 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 CCR10P46092 362 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 TERF1P54274 439 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 TMED2Q15363 201 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 KCTD19Q17RG1 926 aaPredicted RBP26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 MRNIPQ6NTE8 343 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 CCDC137Q6PK04 289 aaKnown RBP26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 SPESP1Q6UW49 350 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 SDCCAG8Q86SQ7 713 aaPredicted RBP26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 ACTRT1Q8TDG2 376 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 TRAPPC9Q96Q05 1148 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 OSBPL9Q96SU4 736 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 P2RY12Q9H244 342 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 CDYLQ9Y232 598 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 PCDHGA6Q9Y5G7 932 aa26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 MRPS18BQ9Y676 258 aaKnown RBP26.26■■□□□ 1.79
SH3GL3-204ENST00000492099 KPNA5O15131 536 aa26.25■■□□□ 1.79
SH3GL3-204ENST00000492099 PFDN6O15212 129 aa26.25■■□□□ 1.79
SH3GL3-204ENST00000492099 KIF5CO60282 957 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms