RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PDGFAP04085 211 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 PRSS56P0CW18 603 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 ST6GAL1P15907 406 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 POLR2CP19387 275 aaPredicted RBP8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 NSG1P42857 185 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 NAP1L1P55209 391 aaKnown RBP8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 GSDMDP57764 484 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 KLRB1Q12918 225 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 GSE1Q14687 1217 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 PRAMEF17Q5VTA0 474 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 ARMC6Q6NXE6 501 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 FBXO38Q6PIJ6 1188 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 AMIGO1Q86WK6 493 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 TBC1D21Q8IYX1 336 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 TXLNBQ8N3L3 684 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 PHC3Q8NDX5 983 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 OR52E1Q8NGJ3 308 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 OR1L3Q8NH93 324 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 CPT1BQ92523 772 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 TFGQ92734 400 aaPredicted RBP8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 MIB2Q96AX9 1013 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 LRRC45Q96CN5 670 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 OR2A14Q96R47 310 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 FERD3LQ96RJ6 166 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 DPH2Q9BQC3 489 aaPredicted RBP8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 MENTQ9BUN1 341 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 NLNQ9BYT8 704 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 TRIM55Q9BYV6 548 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 ETNK1Q9HBU6 452 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 CASS4Q9NQ75 786 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 OR6C2Q9NZP2 312 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 FARSAQ9Y285 508 aaKnown RBP8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 TP53TG5Q9Y2B4 290 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 PRSS21Q9Y6M0 314 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 CAPN6Q9Y6Q1 641 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 PCSK5Q92824 1860 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 ESPL1Q14674 2120 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 DOCK10Q96BY6 2186 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 PRRC2CQ9Y520 2896 aaKnown RBP8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 CCDC162PA2VCL2 907 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 CDC14CA4D256 554 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 C2orf74A8MZ97 194 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 MKRN2OSH3BPM6 223 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 IFRD1O00458 451 aaPredicted RBP8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 KLF7O75840 302 aaPredicted RBP8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 ONECUT2O95948 504 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 KLK3P07288 261 aaPredicted RBP8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 ADRA1DP25100 572 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 MSNP26038 577 aaKnown RBP8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 FDFT1P37268 417 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 GRIA1P42261 906 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 GCGRP47871 477 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 PREPP48147 710 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 ARCN1P48444 511 aaKnown RBP8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 ARL4DP49703 201 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 RPS15P62841 145 aaKnown RBP8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 SRSF1Q07955 248 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 CDH17Q12864 832 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 PRKAA1Q13131 559 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 IL10RAQ13651 578 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 POU6F1Q14863 301 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 SIX1Q15475 284 aaPredicted RBP8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 ZIC1Q15915 447 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 ZRANB3Q5FWF4 1079 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 COLEC12Q5KU26 742 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 LYPLAL1Q5VWZ2 237 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 DRICH1Q6PGQ1 229 aaPredicted RBP8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 SPESP1Q6UW49 350 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 FAM198BQ6UWH4 519 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 UNC5AQ6ZN44 842 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 ZNF662Q6ZS27 426 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 CDHR3Q6ZTQ4 885 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 ZNF534Q76KX8 674 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 NLRP9Q7RTR0 991 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 TAS2R42Q7RTR8 314 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 KIAA1328Q86T90 577 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 SLC13A5Q86YT5 568 aaPredicted RBP8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 TMEM126BQ8IUX1 230 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 OR5K2Q8NHB8 316 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 ATG4AQ8WYN0 398 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 RNF31Q96EP0 1072 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 CHST8Q9H2A9 424 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 PCMTD2Q9NV79 361 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 ACTR10Q9NZ32 417 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 POLG2Q9UHN1 485 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 SERTAD3Q9UJW9 196 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 TCFL5Q9UL49 500 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 ICKQ9UPZ9 632 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 CDYLQ9Y232 598 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 PCDHGB7Q9Y5F8 929 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 ICE1Q9Y2F5 2266 aa8.11□□□□□ -1.11
SMARCB1-207ENST00000491967 POLEQ07864 2286 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 HEATR9A2RTY3 570 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 OR51F1A6NGY5 319 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 HCRTR1O43613 425 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 GPC4O75487 556 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 DNAJB5O75953 348 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 SLCO2B1O94956 709 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 FTH1P02794 183 aa8.1□□□□□ -1.11
SMARCB1-207ENST00000491967 CDH3P22223 829 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms