RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 RHBDF1Q96CC6 855 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 CXorf40BQ96DE9 158 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 CMTM7Q96FZ5 175 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 CCDC138Q96M89 665 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 RNF145Q96MT1 663 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 YME1L1Q96TA2 773 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 PKP2Q99959 881 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 FAM83CQ9BQN1 747 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 TMEM79Q9BSE2 394 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 RNF208Q9H0X6 261 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 CRISPLD1Q9H336 500 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 RAD21L1Q9H4I0 556 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 ELOVL6Q9H5J4 265 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 BRF2Q9HAW0 419 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 IL26Q9NPH9 171 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 GKN1Q9NS71 199 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 GPRC5BQ9NZH0 403 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 IFT80Q9P2H3 777 aaPredicted RBP6.22□□□□□ -1.41
FN1-223ENST00000490833 HECAQ9UBI9 543 aaPredicted RBP6.22□□□□□ -1.41
FN1-223ENST00000490833 ADGRE2Q9UHX3 823 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 ENOPH1Q9UHY7 261 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 BAG5Q9UL15 447 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 SAMD4AQ9UPU9 718 aaKnown RBP6.22□□□□□ -1.41
FN1-223ENST00000490833 TRIM17Q9Y577 477 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 SPO11Q9Y5K1 396 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 HSPE1-MOB4S4R3N1 261 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 CHD5Q8TDI0 1954 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 MYO16Q9Y6X6 1858 aa6.22□□□□□ -1.41
FN1-223ENST00000490833 ATP6AP2A0A1C7CYW4 349 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 NPEPPSL1A6NEC2 478 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 TMEM233B4DJY2 109 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 CDC7O00311 574 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 CLGNO14967 610 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 LSM1O15116 133 aaKnown RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 INPP4BO15327 924 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 CLOCKO15516 846 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 DPM1O60762 260 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 RNASEH1O60930 286 aaKnown RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 LILRB3O75022 631 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 SEC22BO75396 215 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 ATP6AP2O75787 350 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 RNASEH2AO75792 299 aaKnown RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 SIX3O95343 332 aaPredicted RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 TRIM16O95361 564 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 CXCL14O95715 111 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 IFNA14P01570 189 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 ALBP02768 609 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 CATP04040 527 aaKnown RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 RPN2P04844 631 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 JUNP05412 331 aaKnown RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 ALDOCP09972 364 aaKnown RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 ZCCHC18P0CG32 403 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 SLC2A4P14672 509 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 TCN1P20061 433 aaPredicted RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 MYF6P23409 242 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 SERPINB1P30740 379 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 S100A3P33764 101 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 HNF1BP35680 557 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 GRIA2P42262 883 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 MAGEA8P43361 318 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 SPINT3P49223 89 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 RAD23AP54725 363 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 EPHA5P54756 1037 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 POLE2P56282 527 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 CLDN8P56748 225 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 C21orf58P58505 322 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 ST8SIA6P61647 398 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 TLE2Q04725 743 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 PRKCQQ04759 706 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 ELP6Q0PNE2 266 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 MERTKQ12866 999 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 PPIGQ13427 754 aaKnown RBP eCLIP6.21□□□□□ -1.42
FN1-223ENST00000490833 TLR1Q15399 786 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 SMAD1Q15797 465 aaKnown RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 HIST2H2ACQ16777 129 aaPredicted RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 PPP1R3AQ16821 1122 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.21□□□□□ -1.427e-39■□□□□ 10.5
FN1-223ENST00000490833 ZC3H12BQ5HYM0 836 aaKnown RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 NHSL2Q5HYW2 709 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 PAGE2BQ5JRK9 111 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 PITRM1Q5JRX3 1037 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 CTSL3PQ5NE16 218 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 COL13A1Q5TAT6 717 aaPredicted RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 HIST2H2AA3Q6FI13 130 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 GLYATQ6IB77 296 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 NANOGP8Q6NSW7 305 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 PSAPL1Q6NUJ1 521 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 LILRA6Q6PI73 481 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 TTC33Q6PID6 262 aaPredicted RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 CYP20A1Q6UW02 462 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 SBSNQ6UWP8 590 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 GDPD4Q6W3E5 623 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 LINC00299Q6ZSB3 139 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 LYSMD3Q7Z3D4 306 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 GOLGA7Q7Z5G4 137 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 SPRED1Q7Z699 444 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 DSG4Q86SJ6 1040 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 SYVN1Q86TM6 617 aa6.21□□□□□ -1.42
FN1-223ENST00000490833 LDB1Q86U70 411 aaPredicted RBP6.21□□□□□ -1.42
FN1-223ENST00000490833 HIPK1Q86Z02 1210 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms