RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 PRELID3BQ9Y3B1 194 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 PCDHA9Q9Y5H5 950 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 FKBP7Q9Y680 259 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 COMMD10Q9Y6G5 202 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 TNS2Q63HR2 1409 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 COL14A1Q05707 1796 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 RBBP6Q7Z6E9 1792 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 NRCAMQ92823 1304 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 A0A096LPE4 126 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 A0A1W2PPZ6 126 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 E5RI56 91 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 STX16O14662 325 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 RGS10O43665 173 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 PRPSAP2O60256 369 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 GMDSO60547 372 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 RFPL3O75679 317 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CELF2O95319 508 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 METTL18O95568 372 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ANGPTL1O95841 491 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 NDUFB10O96000 172 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SBK3P0C264 359 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CLEC2LP0C7M8 214 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 RAP2AP10114 183 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 MTHFD1P11586 935 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 GPX3P22352 226 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ITPKAP23677 461 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 HTR1EP28566 365 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 PRDX5P30044 214 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 PRKAR1BP31321 381 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SOX6P35712 828 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CTSKP43235 329 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 GSK3BP49841 420 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 PRELPP51888 382 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CDH13P55290 713 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 DNAJB13P59910 316 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SSTP61278 116 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CSNK2BP67870 215 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 FLI1Q01543 452 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SCN1BQ07699 218 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 KCNAB2Q13303 367 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 BTN1A1Q13410 526 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CUL2Q13617 745 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 DGCR6Q14129 220 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ZMYND11Q15326 602 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 TAF12Q16514 161 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 FBXO43Q4G163 708 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CLLU1Q5K131 121 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SPANXN3Q5MJ09 141 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SULT1C3Q6IMI6 304 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 FSTL4Q6MZW2 842 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CASC4Q6P4E1 433 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 TEX261Q6UWH6 196 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 TFAP2EQ6VUC0 442 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 KIAA0907Q7Z7F0 614 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 RBM23Q86U06 439 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 COMMD7Q86VX2 200 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 LSRQ86X29 649 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 RASAL3Q86YV0 1011 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 FUNDC1Q8IVP5 155 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CDKL3Q8IVW4 592 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 OR8H3Q8N146 312 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 PGBD3Q8N328 593 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 LRRC71Q8N4P6 559 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 GDPD1Q8N9F7 314 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF680Q8NEM1 530 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 DNERQ8NFT8 737 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 OR52H1Q8NGJ2 320 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 TSPEARQ8WU66 669 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ASB15Q8WXK1 588 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ELMO3Q96BJ8 720 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 PTERQ96BW5 349 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 LRRC58Q96CX6 371 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SGTBQ96EQ0 304 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 PDLIM5Q96HC4 596 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 KLHL15Q96M94 604 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 NSMCE2Q96MF7 247 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 RNF145Q96MT1 663 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 RNF157Q96PX1 679 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CYP2S1Q96SQ9 504 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ITPAQ9BY32 194 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 TRIM54Q9BYV2 358 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SHARPINQ9H0F6 387 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 DHX35Q9H5Z1 703 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 RNF121Q9H920 327 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 RC3H2Q9HBD1 1191 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 C3orf14Q9HBI5 128 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 EML4Q9HC35 981 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 CD93Q9NPY3 652 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC35C2Q9NQQ7 365 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 INTS7Q9NVH2 962 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 C14orf119Q9NWQ9 140 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC17A6Q9P2U8 582 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 MORF4L1Q9UBU8 362 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 C3orf18Q9UK00 162 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 ACSL5Q9ULC5 683 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 HSPB11Q9Y547 144 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SNX8Q9Y5X2 465 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 U3KQ87 197 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 SNED1Q8TER0 1413 aa4.68□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM92AA1XBS5 289 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms