RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 RHPN2P1A8MT19 583 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 MKRN2OSH3BPM6 223 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 C19orf84I3L1E1 186 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 RAB27BO00194 218 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 MAGEC1O60732 1142 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 CSF2P04141 144 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 KRT19P08727 400 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 IL1R2P27930 398 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 PDIA3P30101 505 aaKnown RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 CORO1AP31146 461 aaKnown RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 UQCRC1P31930 480 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 GKP32189 559 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 ATP5C1P36542 298 aaKnown RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 CARSP49589 748 aaKnown RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 LIG4P49917 911 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 TUBP50607 506 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 RCAN1P53805 252 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 HNRNPKP61978 463 aaKnown RBP eCLIP4.37□□□□□ -1.71
CNN3-206ENST00000487539 TFAMQ00059 246 aaKnown RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 TIAL1Q01085 375 aaKnown RBP eCLIP4.37□□□□□ -1.71
CNN3-206ENST00000487539 CNTN1Q12860 1018 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 CHAF1BQ13112 559 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 HDAC1Q13547 482 aaPredicted RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 GALEQ14376 348 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 HLTFQ14527 1009 aaKnown RBP eCLIP4.37□□□□□ -1.71
CNN3-206ENST00000487539 CYP1B1Q16678 543 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 ZNF284Q2VY69 593 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 ZNF750Q32MQ0 723 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 HNRNPA1L2Q32P51 320 aaKnown RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 ZRANB3Q5FWF4 1079 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 L1TD1Q5T7N2 865 aaKnown RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 TTC22Q5TAA0 569 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 JMJD6Q6NYC1 403 aaPredicted RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 MMS22LQ6ZRQ5 1243 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 UNC13DQ70J99 1090 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 TAOK1Q7L7X3 1001 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 SCD5Q86SK9 330 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 CD302Q8IX05 232 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 SMC5Q8IY18 1101 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 NAGSQ8N159 534 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 CSGALNACT2Q8N6G5 542 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 RUFY2Q8WXA3 655 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 OVCA2Q8WZ82 227 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 STARD8Q92502 1023 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 NRGNQ92686 78 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 GOLGA1Q92805 767 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 CEP295NLQ96MC4 621 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 TSPAN18Q96SJ8 248 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 IL12RB2Q99665 862 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 THAP7Q9BT49 309 aaPredicted RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 ASB7Q9H672 318 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 GPN2Q9H9Y4 310 aaPredicted RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 DDX19AQ9NUU7 478 aaKnown RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 OCIAD1Q9NX40 245 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 MID2Q9UJV3 735 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 GGA2Q9UJY4 613 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 LSM7Q9UK45 103 aaKnown RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 PILRAQ9UKJ1 303 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 NTNG1Q9Y2I2 539 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 TBC1D30Q9Y2I9 924 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 ANK3Q12955 4377 aaKnown RBP4.37□□□□□ -1.71
CNN3-206ENST00000487539 TRPM6Q9BX84 2022 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 NSD1Q96L73 2696 aaPredicted RBP4.36□□□□□ -1.71
CNN3-206ENST00000487539 GOLGA6L7A0A1B0GV03 622 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 PP2D1A8MPX8 630 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 AP4M1O00189 453 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 PLRG1O43660 514 aaKnown RBP4.36□□□□□ -1.71
CNN3-206ENST00000487539 PMPCBO75439 489 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 RTN3O95197 1032 aaPredicted RBP4.36□□□□□ -1.71
CNN3-206ENST00000487539 VNN1O95497 513 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 F9P00740 461 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 IL1BP01584 269 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 MT-ND5P03915 603 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 ANXA2P07355 339 aaKnown RBP4.36□□□□□ -1.71
CNN3-206ENST00000487539 PLA2G4BP0C869 781 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 CD19P15391 556 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 TSHRP16473 764 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 TCN2P20062 427 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 KLK2P20151 261 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 WARSP23381 471 aaKnown RBP4.36□□□□□ -1.71
CNN3-206ENST00000487539 CERS1P27544 350 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 CD82P27701 267 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 CCT6AP40227 531 aaKnown RBP4.36□□□□□ -1.71
CNN3-206ENST00000487539 STK19P49842 368 aaPredicted RBP4.36□□□□□ -1.71
CNN3-206ENST00000487539 PGDP52209 483 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 HDAC4P56524 1084 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 TUBA4AP68366 448 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 SRSF4Q08170 494 aaKnown RBP4.36□□□□□ -1.71
CNN3-206ENST00000487539 ERV3-1Q14264 604 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 TMEM119Q4V9L6 283 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 C4orf46Q504U0 113 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 C10orf120Q5SQS8 335 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 PRAMEF17Q5VTA0 474 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 SEL1L3Q68CR1 1132 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 KCTD16Q68DU8 428 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 FCRL6Q6DN72 434 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 KIRREL2Q6UWL6 708 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 RNF44Q7L0R7 432 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 KCTD20Q7Z5Y7 419 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 PTAR1Q7Z6K3 402 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms