RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 LSMEM2Q8N112 164 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 KRT222Q8N1A0 295 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 BMPERQ8N8U9 685 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 NAT8LQ8N9F0 302 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 AVL9Q8NBF6 648 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 PHC3Q8NDX5 983 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 HEXDCQ8WVB3 486 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 ART4Q93070 314 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 SGSM3Q96HU1 749 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 PPM1MQ96MI6 270 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 FCRL3Q96P31 734 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-209ENST00000487244 SERPINB12Q96P63 405 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 CMKLR1Q99788 373 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 CTRCQ99895 268 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 TRIM51Q9BSJ1 452 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 HGH1Q9BTY7 390 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-209ENST00000487244 PHACTR1Q9C0D0 580 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 KIR3DX1Q9H7L2 352 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 CATSPERZQ9NTU4 200 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 BFARQ9NZS9 450 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 SLC24A2Q9UI40 661 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 ACSL5Q9ULC5 683 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 SOX13Q9UN79 622 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 PCDHGA7Q9Y5G6 932 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 SAR1BQ9Y6B6 198 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 KALRNO60229 2985 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 FER1L5A0AVI2 2057 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 ZCWPW2A0A1B0GU75 182 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 C17orf113A0A1B0GUU1 675 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 NVLO15381 856 aaKnown RBP6.97□□□□□ -1.29
UBE4B-209ENST00000487244 KLK10O43240 276 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 AP2A2O94973 939 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 C9P02748 559 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 TPBGLP0DKB5 382 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 AMD1P17707 334 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 IVDP26440 423 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 CCR7P32248 378 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 CSTF2P33240 577 aaKnown RBP eCLIP6.97□□□□□ -1.29
UBE4B-209ENST00000487244 ABCG1P45844 678 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 SEPHS1P49903 392 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 MRPS25P82663 173 aaKnown RBP6.97□□□□□ -1.29
UBE4B-209ENST00000487244 PRKG2Q13237 762 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 TRA2AQ13595 282 aaKnown RBP eCLIP6.97□□□□□ -1.29
UBE4B-209ENST00000487244 KCNAB1Q14722 419 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 PLCL1Q15111 1095 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 PPP1R7Q15435 360 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 FASTKD1Q53R41 847 aaKnown RBP6.97□□□□□ -1.29
UBE4B-209ENST00000487244 ZNF789Q5FWF6 425 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 CTSL3PQ5NE16 218 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 SAMD5Q5TGI4 173 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 ANKS6Q68DC2 871 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 IRGCQ6NXR0 463 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 CASC4Q6P4E1 433 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 FBXO38Q6PIJ6 1188 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 CERS6Q6ZMG9 384 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 PDZD3Q86UT5 571 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 PLXDC1Q8IUK5 500 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 VRK3Q8IV63 474 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 UNC5BQ8IZJ1 945 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 OTUD6BQ8N6M0 293 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 AGBL5Q8NDL9 886 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 ZNF248Q8NDW4 579 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 MCUQ8NE86 351 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 OR5AR1Q8NGP9 310 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 GRK7Q8WTQ7 553 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 KCNE4Q8WWG9 221 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 ELMO1Q92556 727 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 SLCO2A1Q92959 643 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 PEX13Q92968 403 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.97□□□□□ -1.29
UBE4B-209ENST00000487244 TMEM159Q96B96 161 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 ZNF669Q96BR6 464 aaPredicted RBP6.97□□□□□ -1.29
UBE4B-209ENST00000487244 FAM136AQ96C01 138 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 C9orf72Q96LT7 481 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 PWWP2AQ96N64 755 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 DPYSL5Q9BPU6 564 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 P2RY12Q9H244 342 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 EPB41L1Q9H4G0 881 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 XKR8Q9H6D3 395 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 VPS37BQ9H9H4 285 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 MRM3Q9HC36 420 aaKnown RBP6.97□□□□□ -1.29
UBE4B-209ENST00000487244 CPNE5Q9HCH3 593 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 APMAPQ9HDC9 416 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 SIDT1Q9NXL6 827 aaKnown RBP6.97□□□□□ -1.29
UBE4B-209ENST00000487244 SLC39A1Q9NY26 324 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 ASIC3Q9UHC3 531 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 PCYOX1Q9UHG3 505 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 NOVA2Q9UNW9 492 aaKnown RBP6.97□□□□□ -1.29
UBE4B-209ENST00000487244 CDYLQ9Y232 598 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 B3GALT1Q9Y5Z6 326 aa6.97□□□□□ -1.29
UBE4B-209ENST00000487244 IGHV5-51A0A0C4DH38 117 aa6.96□□□□□ -1.3
UBE4B-209ENST00000487244 SLC5A10A0PJK1 596 aa6.96□□□□□ -1.3
UBE4B-209ENST00000487244 KLHL33A6NCF5 533 aa6.96□□□□□ -1.3
UBE4B-209ENST00000487244 KRT87PA6NCN2 255 aa6.96□□□□□ -1.3
UBE4B-209ENST00000487244 OR6C74A6NCV1 312 aa6.96□□□□□ -1.3
UBE4B-209ENST00000487244 OR5K3A6NET4 321 aa6.96□□□□□ -1.3
UBE4B-209ENST00000487244 SDR42E2A6NKP2 422 aa6.96□□□□□ -1.3
UBE4B-209ENST00000487244 BTN3A3O00478 584 aa6.96□□□□□ -1.3
UBE4B-209ENST00000487244 BTN3A1O00481 513 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms