RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 MEPCEQ7L2J0 689 aaKnown RBP4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 DNAJB7Q7Z6W7 309 aaPredicted RBP4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 THNSL1Q8IYQ7 743 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 SLC4A11Q8NBS3 891 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 CAMKVQ8NCB2 501 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 BBS10Q8TAM1 723 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 SMPDL3BQ92485 455 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 FIG4Q92562 907 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 SEMA4DQ92854 862 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 PHF21AQ96BD5 680 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 ZNF479Q96JC4 524 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 ZNF385AQ96PM9 386 aaKnown RBP4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 ADPGKQ9BRR6 497 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 SYT17Q9BSW7 474 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 FNDC11Q9BVV2 318 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 UBTD1Q9HAC8 227 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 OSER1Q9NX31 292 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 NPAP1Q9NZP6 1156 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 MALT1Q9UDY8 824 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 NOL7Q9UMY1 257 aaKnown RBP4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 VDAC3Q9Y277 283 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 SETD5Q9C0A6 1442 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 SPHKAPQ2M3C7 1700 aa4.77□□□□□ -1.65
PRPF38A-203ENST00000487160 COL22A1Q8NFW1 1626 aaPredicted RBP4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 ZCWPW2A0A1B0GU75 182 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 FEZF1A0PJY2 475 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 HNRNPCL2B2RXH8 293 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 CCER2I3L3R5 266 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 UNC13BO14795 1591 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 EIF3DO15371 548 aaKnown RBP eCLIP4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 WDR1O75083 606 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 RECQL5O94762 991 aaPredicted RBP4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 ZFYVE9O95405 1425 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 KRT19P08727 400 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 TSPY4P0CV99 314 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 TSPY10P0CW01 314 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 FDPSP14324 419 aaKnown RBP4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 PCGF2P35227 344 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 HTR6P50406 440 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 ZNF75DP51815 510 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 POLGP54098 1239 aaPredicted RBP4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 RBPJQ06330 500 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 HSPB3Q12988 150 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 PTPRCAPQ14761 206 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 HYAL4Q2M3T9 481 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 C1QTNF12Q5T7M4 302 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 OR7E24Q6IFN5 339 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 SHQ1Q6PI26 577 aaKnown RBP4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 DCLRE1AQ6PJP8 1040 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 FAM198BQ6UWH4 519 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 CREB3L2Q70SY1 520 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 TTC30BQ8N4P2 665 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 ZNF441Q8N8Z8 693 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 PAPD5Q8NDF8 572 aaKnown RBP4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 LILRB1Q8NHL6 650 aaPredicted RBP4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 SCARB1Q8WTV0 552 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 TMEM255BQ8WV15 326 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 SPDL1Q96EA4 605 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 ADGRG7Q96K78 797 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 FAM84BQ96KN1 310 aaPredicted RBP4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 GBP5Q96PP8 586 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 RAB3IPQ96QF0 476 aaPredicted RBP4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 ERBINQ96RT1 1412 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 TMEM204Q9BSN7 226 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 SLC25A23Q9BV35 468 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 LRRC4Q9HBW1 653 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 PFDN4Q9NQP4 134 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 MIOSQ9NXC5 875 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 ZNF112Q9UJU3 913 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 RALYQ9UKM9 306 aaKnown RBP4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 NCOA3Q9Y6Q9 1424 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 TRPM2O94759 1503 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 LMTK2Q8IWU2 1503 aa4.76□□□□□ -1.65
PRPF38A-203ENST00000487160 NRXN3Q9Y4C0 1643 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 C4orf47A7E2U8 309 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 ANKRD66B4E2M5 251 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 PROB1E7EW31 1015 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 TRIM77I1YAP6 450 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 MEIS2O14770 477 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 BUD23O43709 281 aaKnown RBP4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 GPR137BO60478 399 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 ZBTB11O95625 1053 aaPredicted RBP4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 PENKP01210 267 aaPredicted RBP4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 NGFRP08138 427 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 DANCRP0C864 163 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 GM2AP17900 193 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 USP8P40818 1118 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 ARCN1P48444 511 aaKnown RBP4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 KIF5AQ12840 1032 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 PRKAA1Q13131 559 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 SNTA1Q13424 505 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 IDI1Q13907 227 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 SCARB2Q14108 478 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 SLC39A14Q15043 492 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 KRT39Q6A163 491 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 TRAT1Q6PIZ9 186 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 ZBTB49Q6ZSB9 765 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 PLEKHM3Q6ZWE6 761 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 ERN2Q76MJ5 926 aaKnown RBP4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 SFR1Q86XK3 245 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms