RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ANKRD23Q86SG2 305 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 LONP2Q86WA8 852 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 CTAGE4Q8IX94 777 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 L3MBTL4Q8NA19 623 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 CAMKVQ8NCB2 501 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 SECTM1Q8WVN6 248 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 SORCS1Q8WY21 1168 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 DAZLQ92904 295 aaKnown RBP3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 LINGO1Q96FE5 620 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 SIPA1Q96FS4 1042 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 SLX1AQ9BQ83 275 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 LMF2Q9BU23 707 aaKnown RBP3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 C1QTNF4Q9BXJ3 329 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 TRPC7Q9HCX4 862 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 OSER1Q9NX31 292 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 SPIN1Q9Y657 262 aaPredicted RBP3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 TAF1P21675 1872 aa3.35□□□□□ -1.87
SNRNP27-204ENST00000487029 TEX13DA0A0J9YY54 714 aaPredicted RBP3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 TRIM77I1YAP6 450 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 TULP2O00295 520 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 MEIS2O14770 477 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 EEF1B2P24534 225 aaKnown RBP3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 LIMK1P53667 647 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 PITX1P78337 314 aaPredicted RBP3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 RPL24P83731 157 aaKnown RBP3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 RBPJQ06330 500 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 COASYQ13057 564 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 PRKAA1Q13131 559 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 DUOXA1Q1HG43 343 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 ZNF718Q3SXZ3 478 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 ASPRV1Q53RT3 343 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 STXBP5Q5T5C0 1151 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 LINGO4Q6UY18 593 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 FAM47EQ6ZV65 393 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 DET1Q7L5Y6 550 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 PIWIL4Q7Z3Z4 852 aaKnown RBP3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 GALNTL5Q7Z4T8 443 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 MFN1Q8IWA4 741 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 CEP57L1Q8IYX8 460 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 PPFIBP2Q8ND30 876 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 SFXN2Q96NB2 322 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 LRRC3BQ96PB8 259 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 GBP5Q96PP8 586 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 SPAG5Q96R06 1193 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 BTBD10Q9BSF8 475 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 LRRC1Q9BTT6 524 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 POLR3CQ9BUI4 534 aaPredicted RBP3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 FAM129AQ9BZQ8 928 aa3.34□□□□□ -1.87
SNRNP27-204ENST00000487029 A0A1W2PPQ1 181 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 A0A1W2PS18 150 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 HYKKA2RU49 373 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 PRR32B1ATL7 298 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 CCDC188H7C350 402 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 SYNGR3O43761 229 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 SNRNP70P08621 437 aaKnown RBP3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 RAB40ALP0C0E4 278 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 OR52Z1P0C646 297 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 IFNAR1P17181 557 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 CKMT2P17540 419 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 CBLP22681 906 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 HSPA4P34932 840 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 GP5P40197 560 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 NPY4RP50391 375 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 TPD52P55327 224 aaPredicted RBP3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 PRKCZQ05513 592 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 ACSM1Q08AH1 577 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 GAGE5Q13069 117 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 GAGE6Q13070 117 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 MFAP5Q13361 173 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 PPIGQ13427 754 aaKnown RBP eCLIP3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 SCARB2Q14108 478 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 ALDH1L2Q3SY69 923 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 MDH1BQ5I0G3 518 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 SIRPB2Q5JXA9 342 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 HECTD3Q5T447 861 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 PRR27Q6MZM9 219 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 SPSB3Q6PJ21 355 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 ZBTB49Q6ZSB9 765 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 KCTD8Q6ZWB6 473 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 DGLUCYQ7Z3D6 616 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 ADCK2Q7Z695 626 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 FAM114A1Q8IWE2 563 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 GPALPP1Q8IXQ4 340 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 NAGSQ8N159 534 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 CPSF7Q8N684 471 aaKnown RBP3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 IQUBQ8NA54 791 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 SLC4A11Q8NBS3 891 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 OR5M8Q8NGP6 311 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 ROBO4Q8WZ75 1007 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 ZNF558Q96NG5 402 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 EGFL8Q99944 293 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 ADPGKQ9BRR6 497 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 EVA1AQ9H8M9 152 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 ACKR4Q9NPB9 350 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 ABT1Q9ULW3 272 aaKnown RBP3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 PADI2Q9Y2J8 665 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 LIPGQ9Y5X9 500 aa3.33□□□□□ -1.88
SNRNP27-204ENST00000487029 A0A1W2PPI3 338 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 DENND3A2RUS2 1198 aa3.32□□□□□ -1.88
SNRNP27-204ENST00000487029 ERI2A8K979 691 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms