RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 GFM1Q96RP9 751 aaKnown RBP11.56□□□□□ -0.56
APTX-227ENST00000485479 CPNE1Q99829 537 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 SCNM1Q9BWG6 230 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 TXLNGYQ9BZA5 131 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 SEMA6CQ9H3T2 930 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 RHOJQ9H4E5 214 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 ACSS3Q9H6R3 686 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 TAS2R13Q9NYV9 303 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 IKZF3Q9UKT9 509 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 VWA7Q9Y334 891 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 DHRS7Q9Y394 339 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 KIF1CO43896 1103 aaKnown RBP11.56□□□□□ -0.56
APTX-227ENST00000485479 SHBGP04278 402 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 AMD1P17707 334 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 GP5P40197 560 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 TARDBPQ13148 414 aaKnown RBP eCLIP11.56□□□□□ -0.56
APTX-227ENST00000485479 RPA4Q13156 261 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.56□□□□□ -0.56
APTX-227ENST00000485479 ZNF449Q6P9G9 518 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 FOXR1Q6PIV2 292 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 MBOAT1Q6ZNC8 495 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 FAM20CQ8IXL6 584 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 ANKRD49Q8WVL7 239 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 ADAMTS14Q8WXS8 1223 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 LINGO1Q96FE5 620 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 PAFAH2Q99487 392 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 KIR3DX1Q9H7L2 352 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 EVA1BQ9NVM1 165 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 ADAMTS6Q9UKP5 1117 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 PCDHGA1Q9Y5H4 931 aa11.56□□□□□ -0.56
APTX-227ENST00000485479 HMX2A2RU54 273 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 KLHL33A6NCF5 533 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 OR6C74A6NCV1 312 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 FOXO6A8MYZ6 492 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 NTN3O00634 580 aaPredicted RBP11.55□□□□□ -0.56
APTX-227ENST00000485479 MT-CO3P00414 261 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 GSTA2P09210 222 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 HGFP14210 728 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 JUPP14923 745 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 POLR2CP19387 275 aaPredicted RBP11.55□□□□□ -0.56
APTX-227ENST00000485479 PHBP35232 272 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 GBX1Q14549 363 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 USP10Q14694 798 aaKnown RBP11.55□□□□□ -0.56
APTX-227ENST00000485479 PLEKHS1Q5SXH7 462 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 PHF19Q5T6S3 580 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 FAM45BPQ6NSW5 357 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 IRGCQ6NXR0 463 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 FAM92BQ6ZTR7 304 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 RAB44Q7Z6P3 723 aaPredicted RBP11.55□□□□□ -0.56
APTX-227ENST00000485479 OR5K2Q8NHB8 316 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 FAM45AQ8TCE6 357 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 DLG3Q92796 817 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 TGM7Q96PF1 710 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 CYTH2Q99418 400 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 KLHL25Q9H0H3 589 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 ABCF3Q9NUQ8 709 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 CTNNAL1Q9UBT7 734 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 ICKQ9UPZ9 632 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 CLCA2Q9UQC9 943 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 CACNA1AO00555 2505 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 KNTC1P50748 2209 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 DMXL2Q8TDJ6 3036 aa11.55□□□□□ -0.56
APTX-227ENST00000485479 EXOC1LA0A1B0GW35 172 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 SMIM23A6NLE4 172 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 ARHGEF33A8MVX0 844 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 F8W8V4 182 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 CSO75390 466 aaKnown RBP11.54□□□□□ -0.56
APTX-227ENST00000485479 SPAG6O75602 509 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 SNRNP200O75643 2136 aaKnown RBP11.54□□□□□ -0.56
APTX-227ENST00000485479 TSPAN12O95859 305 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 SYF2O95926 243 aaKnown RBP11.54□□□□□ -0.56
APTX-227ENST00000485479 PROS1P07225 676 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 ITGA2BP08514 1039 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 TNFRSF8P28908 595 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 LIMK2P53671 638 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 NR1D2Q14995 579 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 GALNT7Q86SF2 657 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 PPFIBP2Q8ND30 876 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 OR6C4Q8NGE1 309 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 OR2W6PQ8NHA6 318 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 LCN9Q8WX39 176 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 INPP5DQ92835 1189 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 TSPYL1Q9H0U9 437 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 TRIT1Q9H3H1 467 aaKnown RBP11.54□□□□□ -0.56
APTX-227ENST00000485479 COLEC10Q9Y6Z7 277 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 A0A087WUV0 522 aaPredicted RBP11.54□□□□□ -0.56
APTX-227ENST00000485479 A0A1W2PNU3 283 aaPredicted RBP11.54□□□□□ -0.56
APTX-227ENST00000485479 GSAPA4D1B5 854 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 LILRA5A6NI73 299 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 BTN3A3O00478 584 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 BTN3A1O00481 513 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 CAPN5O15484 640 aaPredicted RBP11.54□□□□□ -0.56
APTX-227ENST00000485479 DUX1O43812 170 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 C1orf105O95561 183 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 CPNE6O95741 557 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 ADRB1P08588 477 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 GSTM1P09488 218 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 ZNF37AP17032 561 aaPredicted RBP11.54□□□□□ -0.56
APTX-227ENST00000485479 GCAP28676 217 aa11.54□□□□□ -0.56
APTX-227ENST00000485479 GPR3P46089 330 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms