RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 GKN2Q86XP6 184 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 NDUFAF2Q8N183 169 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 PELI3Q8N2H9 469 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 SDR16C5Q8N3Y7 309 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 OR56A4Q8NGH8 313 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.57□□□□□ -0.72
DDX56-212ENST00000485367 SLC26A7Q8TE54 656 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 PIH1D2Q8WWB5 315 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 SCRN2Q96FV2 425 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 DEPDC7Q96QD5 511 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 SMIM14Q96QK8 99 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 LGR4Q9BXB1 951 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 FGF22Q9HCT0 170 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 MRPL40Q9NQ50 206 aaKnown RBP10.57□□□□□ -0.72
DDX56-212ENST00000485367 TBCCD1Q9NVR7 557 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 DTLQ9NZJ0 730 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 LHX6Q9UPM6 363 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 CHMP2BQ9UQN3 213 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 TMED5Q9Y3A6 229 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 PCDHB1Q9Y5F3 818 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 HEY1Q9Y5J3 304 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 ADAMTS20P59510 1910 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 ITPR1Q14643 2758 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 APOC4-APOC2K7ER74 178 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 JCHAINP01591 159 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 APOC2P02655 101 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 HLA-DQB2P05538 268 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 HOXC4P09017 264 aaPredicted RBP10.57□□□□□ -0.72
DDX56-212ENST00000485367 ETS2P15036 469 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 TGM2P21980 687 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 CES1P23141 567 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 TRIM23P36406 574 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 EPHB1P54762 984 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 DLG1Q12959 904 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 CBX3Q13185 183 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 DCTN2Q13561 401 aaKnown RBP10.57□□□□□ -0.72
DDX56-212ENST00000485367 RTP5Q14D33 572 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 TRIP10Q15642 601 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 PERM1Q5SV97 790 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 ZFP1Q6P2D0 407 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 Q6ZVL8 140 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 KYQ8NBH2 561 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 PIWIL2Q8TC59 973 aaKnown RBP10.57□□□□□ -0.72
DDX56-212ENST00000485367 ACMSDQ8TDX5 336 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 FATE1Q969F0 183 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 DTD2Q96FN9 168 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 MCCC1Q96RQ3 725 aaPredicted RBP10.57□□□□□ -0.72
DDX56-212ENST00000485367 LGMNQ99538 433 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 RBM38Q9H0Z9 239 aaKnown RBP10.57□□□□□ -0.72
DDX56-212ENST00000485367 SYNDIG1Q9H7V2 258 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 CYP4F12Q9HCS2 524 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 KCTD5Q9NXV2 234 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 ADAMTS6Q9UKP5 1117 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 PSMD13Q9UNM6 376 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 GPR34Q9UPC5 381 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 SH3GLB1Q9Y371 365 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 GPSM3Q9Y4H4 160 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 DTNAQ9Y4J8 743 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 DGKBQ9Y6T7 804 aa10.57□□□□□ -0.72
DDX56-212ENST00000485367 A0A0U1RQS6 177 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 KCNK1O00180 336 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 APOL1O14791 398 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 FZD6O60353 706 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 BRINP1O60477 761 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 CST8O60676 142 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 C1QAP02745 245 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 TFAP2AP05549 437 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 PEX2P28328 305 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 GDF10P55107 478 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 RAB15P59190 212 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 NIPAL4Q0D2K0 466 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 TBL3Q12788 808 aaKnown RBP10.56□□□□□ -0.72
DDX56-212ENST00000485367 IHHQ14623 411 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 KCNJ11Q14654 390 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 C4orf22Q6V702 233 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 RFLNAQ6ZTI6 216 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 TAF8Q7Z7C8 310 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 HEATR4Q86WZ0 1026 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 RFX6Q8HWS3 928 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 CROCCP3Q8IVE0 287 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 CBARPQ8N350 705 aaPredicted RBP10.56□□□□□ -0.72
DDX56-212ENST00000485367 FBXW8Q8N3Y1 598 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 ARL10Q8N8L6 244 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 PYDC1Q8WXC3 89 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 NAT6Q93015 286 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 NMD3Q96D46 503 aaKnown RBP10.56□□□□□ -0.72
DDX56-212ENST00000485367 HDAC11Q96DB2 347 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 XAB2Q9HCS7 855 aaKnown RBP10.56□□□□□ -0.72
DDX56-212ENST00000485367 PHPT1Q9NRX4 125 aaPredicted RBP10.56□□□□□ -0.72
DDX56-212ENST00000485367 TUBA8Q9NY65 449 aaPredicted RBP10.56□□□□□ -0.72
DDX56-212ENST00000485367 CD84Q9UIB8 345 aa10.56□□□□□ -0.72
DDX56-212ENST00000485367 A0A0J9YYE9 177 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 PSMD11O00231 422 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 TNFRSF10CO14798 259 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 HNRNPRO43390 633 aaKnown RBP10.55□□□□□ -0.72
DDX56-212ENST00000485367 USP12O75317 370 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 RFPL1O75677 317 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 TRBC1P01850 177 aa10.55□□□□□ -0.72
DDX56-212ENST00000485367 MYCLP1P12525 358 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms